Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 133485133 | . | A | C | CCDS3080.1:NM_001063.3:c.1342Ata>Cta_NP_001054.1:p.448I>L | Homo sapiens transferrin (TF), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 3v83 | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-15 | VAL | A:448 | A:429 | 2.0 | 0.013 | E | -121.5 | 166.1 | 2.0 | 0.013 | 0.0 |
BCT FE HOH |
8.230 9.664 3.052 |
N N O |
O2 FE O |
||
| VAL | B:448 | B:429 | 1.0 | 0.006 | E | -128.4 | 163.8 | NA | NA | NA | |||||||||||||
| VAL | C:448 | C:429 | 2.0 | 0.013 | E | -115.6 | 166.9 | NA | NA | NA | |||||||||||||
| VAL | D:448 | D:429 | 2.0 | 0.013 | E | -130.1 | 164.2 | NA | NA | NA | |||||||||||||
| VAL | E:448 | E:429 | 2.0 | 0.013 | E | -122.8 | 168.7 | NA | NA | NA | |||||||||||||
| VAL | F:448 | F:429 | 1.0 | 0.006 | E | -134.5 | 168.4 | NA | NA | NA | |||||||||||||
| 3v8x | 2 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-29 | VAL | B:448 | B:429 | 2.0 | 0.013 | E | -130.4 | 166.7 | 2.0 | 0.013 | 0.0 |
NAG HOH |
9.329 8.702 |
CG1 O |
C8 O |
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| 6d03 | 2 | P02787 | 100.0 | 0.0 |
EM |
2018-06-20 | VAL | C:448 | C:429 | 3.0 | 0.019 | E | -133.3 | 167.2 | 3.0 | 0.019 | 0.0 |
CO3 |
8.548 |
N |
O1 |
||
| VAL | D:448 | D:429 | 5.0 | 0.032 | E | -134.7 | 176.6 | 5.0 | 0.032 | 0.0 |
CO3 |
8.672 |
N |
O3 |
|||||||||
| 6d04 | 2 | P02787 | 100.0 | 0.0 |
EM |
2018-06-20 | VAL | C:448 | C:429 | 4.0 | 0.026 | E | -130.4 | 161.7 | 4.0 | 0.026 | 0.0 |
CO3 |
8.732 |
N |
O3 |
||
| VAL | D:448 | D:429 | 4.0 | 0.026 | E | -130.4 | 161.7 | 4.0 | 0.026 | 0.0 |
CO3 |
8.752 |
N |
O3 |
|||||||||
| 6d05 | 2 | P02787 | 100.0 | 0.0 |
EM |
2018-06-20 | VAL | C:448 | C:429 | 4.0 | 0.026 | E | -133.6 | 173.2 | 4.0 | 0.026 | 0.0 |
CO3 |
9.132 |
O |
O2 |
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| VAL | D:448 | D:429 | 4.0 | 0.026 | E | -133.6 | 173.2 | 4.0 | 0.026 | 0.0 |
CO3 |
9.162 |
O |
O2 |
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| 5dyh | 1 | P02787 | 99.86 | 0.0 |
X-RAY |
2016-04-27 | ILE | A:448 | A:429 | 1.0 | 0.006 | E | -139.8 | 161.0 | 1.0 | 0.006 | 0.0 |
CIT 4TI CO3 |
8.797 9.303 7.712 |
HG23 H H |
H21 TI O2 |
||
| ILE | B:448 | B:429 | 2.0 | 0.011 | E | -140.9 | 161.1 | NA | NA | NA | |||||||||||||
| 6uj6 | 1 | Q06AH7 | 99.71 | 0.0 |
X-RAY |
2020-09-30 | VAL | A:448 | A:448 | 3.0 | 0.019 | E | -132.0 | 144.9 | 3.0 | 0.019 | 0.0 |
MLI |
8.987 |
N |
O8 |
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| 3qyt | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-03-14 | VAL | A:429 | A:429 | 1.0 | 0.006 | E | -130.4 | 173.2 | 1.0 | 0.006 | 0.0 |
FE CO3 |
9.591 8.103 |
N N |
FE O3 |
||
| 4x1b | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2015-04-08 | VAL | A:429 | A:429 | 3.0 | 0.019 | E | -132.7 | 152.9 | 3.0 | 0.019 | 0.0 |
MLI HOH |
8.717 3.257 |
N O |
O6 O |
||
| 4x1d | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2015-04-08 | VAL | A:429 | A:429 | 2.0 | 0.013 | E | -124.4 | 151.2 | 2.0 | 0.013 | 0.0 |
MLI HOH |
9.030 8.339 |
O CG1 |
O6 O |
||
| VAL | B:429 | B:429 | 3.0 | 0.019 | E | -124.8 | 150.8 | NA | NA | NA | |||||||||||||
| 5h52 | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2017-11-08 | VAL | A:429 | A:429 | 2.0 | 0.013 | E | -132.7 | 154.3 | 2.0 | 0.013 | 0.0 |
MLI |
9.037 |
O |
O6 |
||
| 5wtd | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2017-12-20 | VAL | A:429 | A:429 | 2.0 | 0.013 | E | -132.5 | 154.4 | 2.0 | 0.013 | 0.0 |
MLI HOH |
8.933 3.213 |
O O |
O6 O |
||
| 6jas | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2020-01-29 | VAL | A:429 | A:429 | 3.0 | 0.019 | E | -119.1 | 157.2 | 3.0 | 0.019 | 0.0 |
MLI HOH |
8.832 9.484 |
O CG2 |
O6 O |
||
| 4h0w | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2012-12-26 | ILE | A:429 | A:429 | 0.0 | 0.0 | E | -137.4 | 159.7 | 0.0 | 0.0 | 0.0 |
FE CO3 HOH |
9.736 8.332 3.055 |
N N O |
FE O3 O |
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| 5x5p | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2018-02-21 | ILE | A:429 | A:429 | 1.0 | 0.006 | E | -134.5 | 162.8 | 1.0 | 0.006 | 0.0 |
MLI RU NTA |
9.024 9.180 9.112 |
O CG2 CG2 |
O6 RU O5 |
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| 5y6k | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2018-01-24 | ILE | A:429 | A:429 | 1.0 | NA | E | -119.8 | 149.9 | 1.0 | NA | NA |
MLI |
8.833 |
O |
O6 |
||
| 6ctc | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2018-10-24 | ILE | A:429 | A:429 | 1.0 | 0.006 | E | -128.0 | 154.5 | 1.0 | 0.006 | 0.0 |
FE CO3 HOH |
9.851 8.424 3.128 |
N N CD1 |
FE O1 O |
||
| 3ve1 | 2 | P02787 | 99.71 | 0.0 |
X-RAY |
2012-02-22 | VAL | B:429 | B:429 | 3.0 | 0.019 | E | -123.3 | 155.1 | 3.0 | 0.019 | 0.0 |
CO3 FE |
8.237 9.740 |
N N |
O3 FE |
||
| VAL | D:429 | D:429 | 3.0 | 0.019 | E | -122.6 | 156.1 | NA | NA | NA | |||||||||||||
| 6soy | 3 | P02787 | 100.0 | 0.0 |
X-RAY |
2019-11-06 | VAL | C:427 | C:429 | 1.0 | 0.006 | E | -129.6 | 155.9 | 1.0 | 0.006 | 0.0 |
FE |
9.518 |
N |
FE |
||
| 6soz | 3 | P02787 | 100.0 | 0.0 |
X-RAY |
2019-11-06 | VAL | C:427 | C:429 | 2.0 | 0.013 | E | -125.3 | 154.3 | 2.0 | 0.013 | 0.0 |
FE |
9.552 |
N |
FE |
||
| 2hav | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2006-06-27 | VAL | A:426 | A:429 | 2.0 | 0.013 | E | -120.4 | 152.1 | 2.0 | 0.013 | 0.0 |
GOL |
8.000 |
CG1 |
O1 |
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| VAL | B:426 | B:429 | 2.0 | 0.013 | E | -129.6 | 176.0 | NA | NA | NA | |||||||||||||
| 3s9l | 2 | P02787 | 99.41 | 0.0 |
X-RAY |
2011-08-10 | VAL | C:443 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| VAL | D:443 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 3s9m | 2 | P02787 | 99.41 | 0.0 |
X-RAY |
2011-08-10 | VAL | C:443 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| VAL | D:443 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 3s9n | 2 | P02787 | 99.41 | 0.0 |
X-RAY |
2011-08-10 | VAL | C:443 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| VAL | D:443 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 2hau | 1 | P02787 | 99.7 | 0.0 |
X-RAY |
2006-06-27 | VAL | A:426 | A:429 | 0.0 | 0.0 | E | -96.0 | 163.0 | 0.0 | 0.0 | 0.0 | ||||||
| VAL | B:426 | B:429 | 2.0 | 0.013 | -102.4 | 163.3 | NA | NA | NA | ||||||||||||||
| 3v89 | 2 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-15 | VAL | B:93 | B:429 | 3.0 | 0.019 | E | -142.9 | 150.2 | 3.0 | 0.019 | 0.0 | ||||||
| 3skp | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-15 | VAL | A:92 | A:429 | 2.0 | 0.013 | E | -134.0 | 157.3 | 2.0 | 0.013 | 0.0 |
SO4 HOH |
9.366 2.977 |
N O |
O3 O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p02787-f1 | 1 | P02787 | 99.86 | 0.0 | ILE | A:448 | A:448 | 0.0 | 0.0 | E | -131.6 | 159.8 | |