Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133485247 . C A CCDS3080.1:NM_001063.3:c.1456Ctc>Atc_NP_001054.1:p.486L>I Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 LEU A:486 A:467 14.0 0.082 H -66.1 -42.5 14.0 0.082 0.0 HOH
 6.478
 N
 O
LEU B:486 B:467 9.0 0.053 H -80.0 -45.8 NA NA NA
LEU C:486 C:467 23.0 0.135 H -68.1 -30.3 NA NA NA
LEU D:486 D:467 17.0 0.1 H -66.9 -40.6 NA NA NA
LEU E:486 E:467 9.0 0.053 H -67.7 -35.7 NA NA NA
LEU F:486 F:467 9.0 0.053 H -71.6 -35.5 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 LEU B:486 B:467 1.0 0.006 H -90.2 -11.5 1.0 0.006 0.0
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 LEU C:486 C:467 3.0 0.018 H -75.1 -22.9 3.0 0.018 0.0
LEU D:486 D:467 4.0 0.024 H -73.2 -32.9 4.0 0.024 0.0
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 LEU C:486 C:467 6.0 0.035 H -70.0 -21.6 6.0 0.035 0.0
LEU D:486 D:467 5.0 0.029 H -69.9 -21.7 5.0 0.029 0.0
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 LEU C:486 C:467 4.0 0.024 H -71.3 -34.8 4.0 0.024 0.0
LEU D:486 D:467 4.0 0.024 H -71.2 -34.7 4.0 0.024 0.0
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 LEU A:486 A:467 6.0 0.035 T -79.3 -0.1 6.0 0.035 0.0
LEU B:486 B:467 8.0 0.047 T -79.1 0.2 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 LEU A:486 A:486 5.0 0.029 H -64.0 -46.4 5.0 0.029 0.0
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 LEU A:467 A:467 15.0 0.088 H -52.0 -44.7 15.0 0.088 0.0
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 LEU A:467 A:467 8.0 0.047 H -68.1 -36.2 8.0 0.047 0.0 HOH
 9.895
 N
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 LEU A:467 A:467 12.0 0.071 H -62.9 -34.2 12.0 0.071 0.0
LEU B:467 B:467 11.0 0.065 H -62.3 -34.1 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 LEU A:467 A:467 10.0 0.059 H -68.9 -35.9 10.0 0.059 0.0
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 LEU A:467 A:467 11.0 0.065 H -61.6 -32.8 11.0 0.065 0.0 HOH
 9.759
 N
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 LEU A:467 A:467 10.0 0.059 H -63.3 -31.4 10.0 0.059 0.0
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 LEU A:467 A:467 12.0 0.071 H -71.1 -43.1 12.0 0.071 0.0 HOH
 6.030
 CD1
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 LEU A:467 A:467 10.0 0.059 H -68.9 -28.7 10.0 0.059 0.0
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 LEU A:467 A:467 4.0 0.024 H -67.8 -17.1 4.0 0.024 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 LEU A:467 A:467 12.0 0.071 H -66.5 -40.3 12.0 0.071 0.0
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 LEU B:467 B:467 11.0 0.065 H -56.6 -38.0 11.0 0.065 0.0 HOH
 7.791
 N
 O
LEU D:467 D:467 11.0 0.065 H -55.0 -39.0 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 LEU C:465 C:467 19.0 0.112 H -80.5 -40.1 19.0 0.112 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 LEU C:465 C:467 21.0 0.124 H -77.7 -43.0 21.0 0.124 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 LEU A:464 A:467 3.0 0.018 G -62.7 -12.4 3.0 0.018 0.0
LEU B:464 B:467 0.0 0.0 T -63.9 -13.8 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 LEU C:481 NA:NA DO NA DO DO DO NA NA NA
LEU D:481 NA:NA DO NA DO DO DO NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 LEU C:481 NA:NA DO NA DO DO DO NA NA NA
LEU D:481 NA:NA DO NA DO DO DO NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 LEU C:481 NA:NA DO NA DO DO DO NA NA NA
LEU D:481 NA:NA DO NA DO DO DO NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 LEU A:464 A:467 2.0 0.012 S -108.3 2.1 2.0 0.012 0.0
LEU B:464 B:467 3.0 0.018 T -80.5 8.4 NA NA NA
3v89 2 P02787 100.0 0.0 X-RAY
 2012-02-15 LEU B:131 B:467 9.0 0.053 H -76.2 -21.2 9.0 0.053 0.0
3skp 1 P02787 100.0 0.0 X-RAY
 2012-02-15 LEU A:130 A:467 0.0 0.0 S -85.2 -1.0 0.0 0.0 0.0 HOH
 3.738
 CA
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 LEU A:486 A:486 13.0 0.076 H -66.7 -43.3