Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 133487001 | . | G | A | CCDS3080.1:NM_001063.3:c.1615Gct>Act_NP_001054.1:p.539A>T | Homo sapiens transferrin (TF), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 3v83 | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-15 | ALA | A:539 | A:520 | 0.0 | 0.0 | H | -65.6 | -33.5 | 0.0 | 0.0 | 0.0 |
BCT HOH |
7.336 3.367 |
CB CA |
O3 O |
||
| ALA | B:539 | B:520 | 0.0 | 0.0 | H | -68.9 | -38.5 | NA | NA | NA | |||||||||||||
| ALA | C:539 | C:520 | 0.0 | 0.0 | H | -68.5 | -48.4 | NA | NA | NA | |||||||||||||
| ALA | D:539 | D:520 | 0.0 | 0.0 | H | -64.4 | -33.8 | NA | NA | NA | |||||||||||||
| ALA | E:539 | E:520 | 1.0 | 0.009 | H | -67.6 | -42.4 | NA | NA | NA | |||||||||||||
| ALA | F:539 | F:520 | 0.0 | 0.0 | H | -66.0 | -37.5 | NA | NA | NA | |||||||||||||
| 3v8x | 2 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-29 | ALA | B:539 | B:520 | 1.0 | 0.009 | H | -65.1 | -39.0 | 1.0 | 0.009 | 0.0 |
HOH |
7.615 |
CB |
O |
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| 6d03 | 2 | P02787 | 100.0 | 0.0 |
EM |
2018-06-20 | ALA | C:539 | C:520 | 0.0 | 0.0 | H | -63.6 | -33.9 | 0.0 | 0.0 | 0.0 |
CO3 |
8.942 |
CB |
O2 |
||
| ALA | D:539 | D:520 | 0.0 | 0.0 | H | -74.8 | -44.4 | 0.0 | 0.0 | 0.0 |
CO3 |
9.210 |
CB |
O1 |
|||||||||
| 6d04 | 2 | P02787 | 100.0 | 0.0 |
EM |
2018-06-20 | ALA | C:539 | C:520 | 0.0 | 0.0 | H | -69.0 | -29.3 | 0.0 | 0.0 | 0.0 |
CO3 |
8.983 |
CB |
O2 |
||
| ALA | D:539 | D:520 | 0.0 | 0.0 | H | -69.1 | -29.2 | 0.0 | 0.0 | 0.0 |
CO3 |
8.985 |
CB |
O2 |
|||||||||
| 6d05 | 2 | P02787 | 100.0 | 0.0 |
EM |
2018-06-20 | ALA | C:539 | C:520 | 1.0 | 0.009 | H | -70.3 | -35.1 | 1.0 | 0.009 | 0.0 |
CO3 |
8.508 |
CB |
O2 |
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| ALA | D:539 | D:520 | 0.0 | 0.0 | H | -70.3 | -35.1 | 0.0 | 0.0 | 0.0 |
CO3 |
8.561 |
CB |
O2 |
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| 5dyh | 1 | P02787 | 99.86 | 0.0 |
X-RAY |
2016-04-27 | ALA | A:539 | A:520 | 0.0 | 0.0 | H | -65.7 | -30.7 | 0.0 | 0.0 | 0.0 |
CIT CO3 |
5.842 7.863 |
H HB2 |
O6 O3 |
||
| ALA | B:539 | B:520 | 0.0 | 0.0 | H | -66.4 | -31.2 | NA | NA | NA | |||||||||||||
| 6uj6 | 1 | Q06AH7 | 99.71 | 0.0 |
X-RAY |
2020-09-30 | ALA | A:539 | A:539 | 0.0 | 0.0 | H | -67.1 | -36.0 | 0.0 | 0.0 | 0.0 |
MLI HOH |
7.687 7.433 |
CB N |
O8 O |
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| 3qyt | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-03-14 | ALA | A:520 | A:520 | 1.0 | 0.009 | H | -55.9 | -47.5 | 1.0 | 0.009 | 0.0 |
CO3 |
7.365 |
CB |
O1 |
||
| 4x1b | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2015-04-08 | ALA | A:520 | A:520 | 0.0 | 0.0 | H | -68.5 | -34.9 | 0.0 | 0.0 | 0.0 |
MLI HOH |
7.908 3.534 |
CB CA |
O6 O |
||
| 4x1d | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2015-04-08 | ALA | A:520 | A:520 | 0.0 | 0.0 | H | -67.9 | -33.4 | 0.0 | 0.0 | 0.0 |
MLI |
7.701 |
CB |
O6 |
||
| ALA | B:520 | B:520 | 0.0 | 0.0 | H | -67.1 | -33.3 | NA | NA | NA | |||||||||||||
| 5h52 | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2017-11-08 | ALA | A:520 | A:520 | 0.0 | 0.0 | H | -70.3 | -35.7 | 0.0 | 0.0 | 0.0 |
MLI |
8.053 |
CB |
O6 |
||
| 5wtd | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2017-12-20 | ALA | A:520 | A:520 | 0.0 | 0.0 | H | -68.8 | -35.5 | 0.0 | 0.0 | 0.0 |
MLI HOH |
7.894 3.535 |
CB CA |
O6 O |
||
| 6jas | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2020-01-29 | ALA | A:520 | A:520 | 0.0 | 0.0 | H | -68.0 | -34.2 | 0.0 | 0.0 | 0.0 |
MLI HOH |
7.781 7.057 |
CB N |
O6 O |
||
| 4h0w | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2012-12-26 | ALA | A:520 | A:520 | 0.0 | 0.0 | H | -62.7 | -38.8 | 0.0 | 0.0 | 0.0 |
CO3 HOH |
7.756 3.524 |
CB CA |
O1 O |
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| 5x5p | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2018-02-21 | ALA | A:520 | A:520 | 1.0 | 0.009 | H | -64.7 | -36.2 | 1.0 | 0.009 | 0.0 |
MLI |
7.801 |
CB |
O6 |
||
| 5y6k | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2018-01-24 | ALA | A:520 | A:520 | 0.0 | 0.0 | H | -66.1 | -36.3 | 0.0 | 0.0 | 0.0 |
MLI |
8.144 |
CB |
O6 |
||
| 6ctc | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2018-10-24 | ALA | A:520 | A:520 | 0.0 | 0.0 | H | -61.4 | -36.7 | 0.0 | 0.0 | 0.0 |
CO3 HOH |
7.823 3.406 |
CB CA |
O1 O |
||
| 3ve1 | 2 | P02787 | 99.71 | 0.0 |
X-RAY |
2012-02-22 | ALA | B:520 | B:520 | 1.0 | 0.009 | H | -60.1 | -45.6 | 1.0 | 0.009 | 0.0 |
CO3 HOH |
7.851 6.086 |
CB N |
O2 O |
||
| ALA | D:520 | D:520 | 0.0 | 0.0 | H | -61.7 | -47.8 | NA | NA | NA | |||||||||||||
| 6soy | 3 | P02787 | 100.0 | 0.0 |
X-RAY |
2019-11-06 | ALA | C:518 | C:520 | 0.0 | 0.0 | H | -70.0 | -36.2 | 0.0 | 0.0 | 0.0 | ||||||
| 6soz | 3 | P02787 | 100.0 | 0.0 |
X-RAY |
2019-11-06 | ALA | C:518 | C:520 | 0.0 | 0.0 | H | -69.8 | -32.5 | 0.0 | 0.0 | 0.0 | ||||||
| 2hav | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2006-06-27 | ALA | A:517 | A:520 | 0.0 | 0.0 | H | -80.3 | -23.4 | 0.0 | 0.0 | 0.0 |
CIT |
5.379 |
N |
O4 |
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| ALA | B:517 | B:520 | 0.0 | 0.0 | H | -75.3 | -25.4 | NA | NA | NA | |||||||||||||
| 3s9l | 2 | P02787 | 99.41 | 0.0 |
X-RAY |
2011-08-10 | ALA | C:534 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| ALA | D:534 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 3s9m | 2 | P02787 | 99.41 | 0.0 |
X-RAY |
2011-08-10 | ALA | C:534 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| ALA | D:534 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 3s9n | 2 | P02787 | 99.41 | 0.0 |
X-RAY |
2011-08-10 | ALA | C:534 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| ALA | D:534 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 2hau | 1 | P02787 | 99.7 | 0.0 |
X-RAY |
2006-06-27 | ALA | A:517 | A:520 | 0.0 | 0.0 | H | -67.4 | -37.7 | 0.0 | 0.0 | 0.0 | ||||||
| ALA | B:517 | B:520 | 0.0 | 0.0 | H | -67.2 | -13.8 | NA | NA | NA | |||||||||||||
| 3v89 | 2 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-15 | ALA | B:184 | B:520 | 0.0 | 0.0 | H | -66.1 | -44.5 | 0.0 | 0.0 | 0.0 | ||||||
| 3skp | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-15 | ALA | A:183 | A:520 | 1.0 | 0.009 | H | -68.8 | -33.8 | 1.0 | 0.009 | 0.0 |
SO4 HOH |
6.190 3.466 |
N CA |
O1 O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p02787-f1 | 1 | P02787 | 99.86 | 0.0 | ALA | A:539 | A:539 | 0.0 | 0.0 | H | -65.1 | -36.8 | |