Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133494414 . C A CCDS3080.1:NM_001063.3:c.1825Cgg>Agg_NP_001054.1:p.609R>R Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 ARG A:609 A:590 13.0 0.058 -77.3 154.9 13.0 0.058 0.0 HOH
 2.984
 NH2
 O
ARG B:609 B:590 14.0 0.062 -76.4 153.8 NA NA NA
ARG C:609 C:590 13.0 0.058 -80.3 157.8 NA NA NA
ARG D:609 D:590 14.0 0.062 -83.6 158.0 NA NA NA
ARG E:609 E:590 15.0 0.067 -71.3 151.0 NA NA NA
ARG F:609 F:590 16.0 0.071 -84.5 148.1 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 ARG B:609 B:590 11.0 0.049 -74.8 159.4 11.0 0.049 0.0 HOH
 3.986
 CB
 O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 ARG C:609 C:590 20.0 0.089 -72.0 167.0 20.0 0.089 0.0
ARG D:609 D:590 22.0 0.098 -69.4 172.3 22.0 0.098 0.0
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 ARG C:609 C:590 21.0 0.093 -73.6 176.4 21.0 0.093 0.0
ARG D:609 D:590 22.0 0.098 -73.5 176.3 22.0 0.098 0.0
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 ARG C:609 C:590 16.0 0.071 -75.2 162.7 16.0 0.071 0.0
ARG D:609 D:590 16.0 0.071 -75.2 162.7 16.0 0.071 0.0
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 ARG A:609 A:590 30.0 0.133 -73.3 144.0 30.0 0.133 0.0
ARG B:609 B:590 31.0 0.138 -74.9 143.3 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 ARG A:609 A:609 15.0 0.067 -84.5 150.3 15.0 0.067 0.0 GOL
 8.379
 C
 C3
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 ARG A:590 A:590 19.0 0.084 -94.2 155.2 19.0 0.084 0.0
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ARG A:590 A:590 15.0 0.067 -81.8 148.9 15.0 0.067 0.0 GOL
HOH
 7.058
3.223
 C
CA
 O3
O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ARG A:590 A:590 14.0 0.062 -77.7 143.3 14.0 0.062 0.0 GOL
HOH
 8.503
3.441
 C
CB
 O3
O
ARG B:590 B:590 13.0 0.058 -77.4 143.6 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 ARG A:590 A:590 14.0 0.062 -79.8 148.7 14.0 0.062 0.0
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 ARG A:590 A:590 17.0 0.076 -81.0 155.6 17.0 0.076 0.0 HOH
 3.323
 CA
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 ARG A:590 A:590 17.0 0.076 -75.7 156.1 17.0 0.076 0.0 HOH
 3.483
 CG
 O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 ARG A:590 A:590 11.0 0.049 -70.8 143.6 11.0 0.049 0.0 HOH
 4.481
 CG
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 ARG A:590 A:590 15.0 0.067 -84.9 158.1 15.0 0.067 0.0
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 ARG A:590 A:590 14.0 0.062 -78.8 149.7 14.0 0.062 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 ARG A:590 A:590 12.0 0.053 -70.0 153.8 12.0 0.053 0.0 HOH
 7.536
 CD
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 ARG B:590 B:590 13.0 0.058 -79.6 145.2 13.0 0.058 0.0 GOL
HOH
 7.838
5.104
 C
CG
 O1
O
ARG D:590 D:590 12.0 0.053 -82.0 145.7 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ARG C:588 C:590 29.0 0.129 -65.0 129.0 29.0 0.129 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ARG C:588 C:590 18.0 0.08 -76.6 139.8 18.0 0.08 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 ARG A:587 A:590 15.0 0.067 -75.7 147.9 15.0 0.067 0.0 GOL
 8.803
 C
 C1
ARG B:587 B:590 19.0 0.084 -80.5 159.6 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ARG C:604 C:590 16.0 0.071 -90.6 157.5 16.0 0.071 0.0
ARG D:604 D:590 18.0 0.08 -80.2 150.2 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ARG C:604 C:590 9.0 0.04 -84.8 162.4 9.0 0.04 0.0
ARG D:604 D:590 21.0 0.093 -73.3 157.6 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ARG C:604 C:590 14.0 0.062 E -72.2 150.4 14.0 0.062 0.0
ARG D:604 D:590 23.0 0.102 -77.9 168.9 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 ARG A:587 A:590 29.0 0.129 -68.6 154.7 29.0 0.129 0.0
ARG B:587 B:590 31.0 0.138 E -75.9 133.6 NA NA NA
3v89 2 P02787 100.0 0.0 X-RAY
 2012-02-15 ARG B:254 B:590 24.0 0.107 -64.8 156.1 24.0 0.107 0.0
3skp 1 P02787 100.0 0.0 X-RAY
 2012-02-15 ARG A:253 A:590 42.0 0.187 -70.9 143.7 42.0 0.187 0.0 SO4
HOH
 9.847
2.684
 O
NE
 O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 ARG A:609 A:609 12.0 0.053 -82.2 151.6