Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133494420 . G A CCDS3080.1:NM_001063.3:c.1831Gat>Aat_NP_001054.1:p.611D>N Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 ASP A:611 A:592 44.0 0.293 G -67.9 -11.1 44.0 0.293 0.0 HOH
 2.299
 OD2
 O
ASP B:611 B:592 53.0 0.353 G -65.6 -15.0 NA NA NA
ASP C:611 C:592 55.0 0.367 T -65.7 -42.2 NA NA NA
ASP D:611 D:592 61.0 0.407 T -73.4 -9.2 NA NA NA
ASP E:611 E:592 50.0 0.333 G -66.1 -21.6 NA NA NA
ASP F:611 F:592 57.0 0.38 G -74.9 -16.3 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 ASP B:611 B:592 92.0 0.613 T -81.5 -2.8 92.0 0.613 0.0 HOH
 2.573
 OD1
 O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 ASP C:611 C:592 103.0 0.687 S -90.7 -29.3 103.0 0.687 0.0
ASP D:611 D:592 111.0 0.74 T -75.5 -24.3 111.0 0.74 0.0
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 ASP C:611 C:592 99.0 0.66 T -75.2 -28.9 99.0 0.66 0.0
ASP D:611 D:592 97.0 0.647 T -75.2 -29.0 97.0 0.647 0.0
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 ASP C:611 C:592 97.0 0.647 G -79.9 -21.0 97.0 0.647 0.0
ASP D:611 D:592 97.0 0.647 G -79.9 -20.9 97.0 0.647 0.0
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 ASP A:611 A:592 86.0 0.573 G -63.8 -16.9 86.0 0.573 0.0
ASP B:611 B:592 89.0 0.593 G -63.4 -16.9 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 ASP A:611 A:611 88.0 0.587 G -68.5 -9.7 88.0 0.587 0.0 GOL
GOL
HOH
 7.217
7.992
8.005
 N
CB
CB
 O3
C1
O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 ASP A:592 A:592 92.0 0.613 H -66.4 -4.9 92.0 0.613 0.0
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ASP A:592 A:592 95.0 0.633 G -70.4 -10.6 95.0 0.633 0.0 GOL
HOH
 5.294
2.910
 N
N
 O3
O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ASP A:592 A:592 90.0 0.6 G -67.2 -3.3 90.0 0.6 0.0 GOL
HOH
 6.930
2.231
 N
N
 O3
O
ASP B:592 B:592 92.0 0.613 G -67.3 -3.7 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 ASP A:592 A:592 94.0 0.627 G -66.5 -12.1 94.0 0.627 0.0
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 ASP A:592 A:592 93.0 0.62 G -73.3 -8.9 93.0 0.62 0.0 HOH
 3.431
 O
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 ASP A:592 A:592 96.0 0.64 G -73.8 -6.7 96.0 0.64 0.0 HOH
 6.133
 OD1
 O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 ASP A:592 A:592 89.0 0.593 T -83.4 -9.1 89.0 0.593 0.0 HOH
 2.919
 O
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 ASP A:592 A:592 98.0 0.653 G -75.0 -6.2 98.0 0.653 0.0
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 ASP A:592 A:592 98.0 0.653 G -70.6 0.7 98.0 0.653 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 ASP A:592 A:592 91.0 0.607 T -79.3 -8.5 91.0 0.607 0.0 HOH
 9.862
 OD1
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 ASP B:592 B:592 88.0 0.587 G -71.6 -21.7 88.0 0.587 0.0 GOL
GOL
HOH
 7.844
6.172
5.031
 CB
N
CB
 C3
O1
O
ASP D:592 D:592 90.0 0.6 G -73.5 -19.2 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ASP C:590 C:592 93.0 0.62 G -79.7 31.5 93.0 0.62 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ASP C:590 C:592 77.0 0.513 G -82.3 42.1 77.0 0.513 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 ASP A:589 A:592 96.0 0.64 G -69.1 -10.3 96.0 0.64 0.0 GOL
 7.039
 N
 O1
ASP B:589 B:592 99.0 0.66 G -58.0 13.4 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ASP C:606 C:592 89.0 0.593 T -68.6 -38.4 89.0 0.593 0.0
ASP D:606 D:592 92.0 0.613 T -71.6 -32.5 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ASP C:606 C:592 75.0 0.5 T -67.4 -48.1 75.0 0.5 0.0
ASP D:606 D:592 94.0 0.627 T -70.3 -30.0 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ASP C:606 C:592 90.0 0.6 G -81.9 -17.2 90.0 0.6 0.0
ASP D:606 D:592 100.0 0.667 S -83.2 -25.7 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 ASP A:589 A:592 59.0 0.393 T -72.6 -171.6 59.0 0.393 0.0
ASP B:589 B:592 85.0 0.567 G -65.1 -16.2 NA NA NA
3v89 2 P02787 100.0 0.0 X-RAY
 2012-02-15 ASP B:256 B:592 118.0 0.787 H -62.4 -51.0 118.0 0.787 0.0
3skp 1 P02787 100.0 0.0 X-RAY
 2012-02-15 ASP A:255 A:592 120.0 0.8 G -74.5 -4.7 120.0 0.8 0.0 SO4
HOH
 8.985
2.263
 O
OD1
 O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 ASP A:611 A:611 69.0 0.46 G -65.9 -20.9