Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133495924 . C A CCDS3080.1:NM_001063.3:c.1904tCg>tAg_NP_001054.1:p.635S>* Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 SER A:635 A:616 92.0 NA S -95.5 -53.3 92.0 NA NA HOH
 7.437
 O
 O
SER B:635 B:616 89.0 NA S -107.4 121.6 NA NA NA
SER C:635 C:616 123.0 1.0 T -73.4 106.2 NA NA NA
SER D:635 D:616 112.0 0.974 S -67.9 125.8 NA NA NA
SER E:635 E:616 113.0 0.983 S -76.2 118.8 NA NA NA
SER F:635 F:616 97.0 0.843 S -110.4 -174.9 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 SER B:635 B:616 122.0 1.0 T -79.7 -36.0 110.0 0.957 0.043 A:Q9K0U9:0.104
 C8E
HOH
 9.046
5.589
 O
O
 C1
O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 SER C:635 C:616 113.0 0.983 T -73.2 119.9 111.0 0.965 0.018 A:P02786:0.017
SER D:635 D:616 105.0 0.913 T -69.5 119.5 96.0 0.835 0.078 B:P02786:0.078
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 SER C:635 C:616 109.0 0.948 T -71.3 131.9 100.0 0.87 0.078 A:P02786:0.078
SER D:635 D:616 112.0 0.974 T -71.3 132.0 100.0 0.87 0.104 B:P02786:0.104
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 SER C:635 C:616 110.0 0.957 T -72.9 139.3 99.0 0.861 0.096 A:P02786:0.096
SER D:635 D:616 109.0 0.948 T -72.9 139.2 101.0 0.878 0.07 B:P02786:0.07
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 SER A:635 A:616 117.0 1.0 T -78.9 -50.4 117.0 1.0 0.0
SER B:635 B:616 121.0 1.0 T -77.5 -49.1 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 SER A:635 NA:NA DO NA DO DO DO NA NA NA
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 SER A:616 A:616 105.0 0.913 T -68.3 135.6 105.0 0.913 0.0
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 SER A:616 NA:NA DO NA DO DO DO NA NA NA
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 SER A:616 NA:NA DO NA DO DO DO NA NA NA
SER B:616 NA:NA DO NA DO DO DO NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 SER A:616 NA:NA DO NA DO DO DO NA NA NA
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 SER A:616 NA:NA DO NA DO DO DO NA NA NA
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 SER A:616 NA:NA DO NA DO DO DO NA NA NA
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 SER A:616 A:616 110.0 0.957 S -91.9 120.6 110.0 0.957 0.0
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 SER A:616 NA:NA DO NA DO DO DO NA NA NA
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 SER A:616 NA:NA DO NA DO DO DO NA NA NA
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 SER A:616 A:616 117.0 1.0 T -79.9 -45.6 117.0 1.0 0.0
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 SER B:616 B:616 99.0 0.861 T -91.6 -65.1 73.0 0.635 0.226 A:Q09057:0.226
 HOH
 2.250
 O
 O
SER D:616 D:616 98.0 0.852 T -91.2 -65.8 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 SER C:614 NA:NA DO NA DO DO DO NA NA NA
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 SER C:614 NA:NA DO NA DO DO DO NA NA NA
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 SER A:613 A:616 112.0 0.974 S -57.2 -74.3 112.0 0.974 0.0
SER B:613 B:616 112.0 0.974 S -88.5 -82.1 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 SER C:630 C:616 133.0 1.0 T -41.9 -31.0 131.0 1.0 0.0 A:P02786:0.017
SER D:630 D:616 131.0 1.0 T -83.8 -28.5 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 SER C:630 C:616 135.0 1.0 T -59.7 -40.4 130.0 1.0 0.0 A:P02786:0.043
SER D:630 D:616 132.0 1.0 T -49.5 -41.6 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 SER C:630 C:616 129.0 1.0 T -76.8 -31.0 129.0 1.0 0.0
SER D:630 D:616 131.0 1.0 T -77.1 -32.9 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 SER A:613 A:616 136.0 1.0 S 74.1 -58.4 136.0 1.0 0.0
SER B:613 B:616 116.0 1.0 T -77.7 -55.7 NA NA NA
3v89 2 P02787 100.0 0.0 X-RAY
 2012-02-15 SER B:280 B:616 107.0 0.93 S -72.9 -68.3 101.0 0.878 0.052 A:Q9JPJ0:0.052
3skp 1 P02787 100.0 0.0 X-RAY
 2012-02-15 SER A:279 A:616 95.0 0.826 S -71.0 112.1 95.0 0.826 0.0 HOH
 2.982
 OG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 SER A:635 A:635 123.0 1.0 T -86.4 -31.7