Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 183898715 | . | C | A | CCDS43177.1:NM_004068.3:c.508Cgg>Agg_NP_004059.2:p.170R>R | Homo sapiens adaptor related protein complex 2 mu 1 subunit (AP2M1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 2bp5 | 1 | P84092 | 100.0 | 0.0 |
X-RAY |
2005-07-06 | ARG | A:170 | M:170 | 133.0 | 0.591 | S | -111.2 | 104.8 | 133.0 | 0.591 | 0.0 |
HOH |
3.011 |
O |
O |
||
| 2jkr | 4 | P84092 | 100.0 | 0.0 |
X-RAY |
2008-10-28 | ARG | F:170 | M:170 | 145.0 | 0.644 | S | -112.9 | 155.4 | 145.0 | 0.644 | 0.0 | ||||||
| ARG | J:170 | U:170 | 144.0 | 0.64 | S | -114.4 | 156.3 | NA | NA | NA | |||||||||||||
| 2jkt | 4 | P84092 | 100.0 | 0.0 |
X-RAY |
2008-10-28 | ARG | F:170 | M:170 | 144.0 | 0.64 | S | -107.7 | 169.9 | 144.0 | 0.64 | 0.0 | ||||||
| ARG | J:170 | U:170 | 142.0 | 0.631 | S | -107.3 | 169.1 | NA | NA | NA | |||||||||||||
| 2vgl | 3 | P84092 | 100.0 | 0.0 |
X-RAY |
2007-12-25 | ARG | C:170 | M:170 | 127.0 | 0.564 | S | -130.0 | 110.2 | 118.0 | 0.524 | 0.04 |
B:P63010:0.04 |
|||||
| 6owo | 3 | P84091 | 100.0 | 0.0 |
EM |
2019-09-11 | ARG | C:170 | M:170 | 128.0 | 0.569 | S | -147.8 | 122.1 | 128.0 | 0.569 | 0.0 | ||||||
| 6yae | 3 | P84092 | 100.0 | 0.0 |
EM |
2020-07-29 | ARG | C:170 | M:170 | 151.0 | 0.671 | S | -152.2 | 107.6 | 150.0 | 0.667 | 0.004 |
B:P63010:0.004 |
|||||
| 6oxl | 3 | P84091 | 99.77 | 0.0 |
EM |
2019-09-11 | ARG | C:170 | M:170 | 153.0 | 0.68 | S | -151.9 | 131.4 | 148.0 | 0.658 | 0.022 |
B:Q9DBG3:0.022 |
|||||
| 2xa7 | 3 | P84092 | 97.53 | 0.0 |
X-RAY |
2010-07-21 | ARG | C:170 | M:170 | 139.0 | 0.618 | S | -124.3 | 121.3 | 139.0 | 0.618 | 0.0 | ||||||
| 4uqi | 3 | P84092 | 97.53 | 0.0 |
X-RAY |
2014-07-30 | ARG | C:170 | M:170 | 130.0 | 0.578 | S | -137.5 | 108.3 | 121.0 | 0.538 | 0.04 |
B:P63010:0.04 |
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| 5fpi | 1 | P84092 | 97.53 | 0.0 |
X-RAY |
2016-01-20 | ARG | A:170 | A:170 | 113.0 | 0.502 | S | -97.7 | 95.3 | 113.0 | 0.502 | 0.0 |
HOH |
3.619 |
C |
O |
||
| 6qh5 | 3 | P84092 | 97.53 | 0.0 |
X-RAY |
2019-09-04 | ARG | C:170 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 6qh5 | 4 | P84092 | 97.53 | 0.0 |
X-RAY |
2019-09-04 | ARG | D:170 | M:170 | 140.0 | 0.622 | S | -125.7 | 108.3 | 127.0 | 0.564 | 0.058 |
B:P63010:0.058 |
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| 6qh6 | 3 | Q3ZC13 | 97.53 | 0.0 |
X-RAY |
2019-09-04 | ARG | C:170 | M:170 | 170.0 | 0.756 | S | -156.9 | 126.1 | 170.0 | 0.756 | 0.0 | ||||||
| 6qh6 | 4 | P84092 | 97.53 | 0.0 |
X-RAY |
2019-09-04 | ARG | D:170 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 6qh7 | 3 | Q3ZC13 | 97.53 | 0.0 |
X-RAY |
2019-09-04 | ARG | C:170 | M:170 | 164.0 | 0.729 | S | -162.5 | 118.5 | 164.0 | 0.729 | 0.0 | ||||||
| ARG | D:170 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 6yaf | 3 | P84092 | 97.53 | 0.0 |
EM |
2020-07-29 | ARG | C:170 | M:170 | 86.0 | 0.382 | S | -140.8 | 165.1 | 86.0 | 0.382 | 0.0 | ||||||
| 6yah | 3 | P84092 | 97.53 | 0.0 |
EM |
2020-07-29 | ARG | C:170 | M:170 | 86.0 | 0.382 | S | -140.8 | 165.1 | 86.0 | 0.382 | 0.0 | ||||||
| 1bw8 | 1 | P84092 | 99.37 | 0.0 |
X-RAY |
1998-11-25 | ARG | A:56 | A:170 | 143.0 | 0.636 | S | -111.5 | 95.8 | 143.0 | 0.636 | 0.0 |
HOH |
2.929 |
NH1 |
O |
||
| 1i31 | 1 | P84092 | 100.0 | 0.0 |
X-RAY |
2001-02-21 | ARG | A:49 | A:170 | 135.0 | 0.6 | S | -102.0 | 100.4 | 135.0 | 0.6 | 0.0 |
HOH |
2.895 |
NH2 |
O |
||
| 2pr9 | 1 | P84092 | 94.59 | 0.0 |
X-RAY |
2008-03-18 | ARG | A:34 | A:170 | 139.0 | 0.618 | S | -84.8 | 92.5 | 139.0 | 0.618 | 0.0 |
HOH |
3.112 |
O |
O |
||
| 3h85 | 1 | P84092 | 94.59 | 0.0 |
X-RAY |
2009-11-24 | ARG | A:34 | A:170 | 127.0 | 0.564 | S | 80.1 | 68.6 | 127.0 | 0.564 | 0.0 |
HOH |
4.909 |
N |
O |
||
| 5wrl | 1 | P84092 | 100.0 | 0.0 |
X-RAY |
2017-12-06 | ARG | A:13 | A:170 | 123.0 | 0.547 | S | -99.0 | 110.0 | 123.0 | 0.547 | 0.0 | ||||||
| 5wrm | 1 | P84092 | 100.0 | 0.0 |
X-RAY |
2017-12-06 | ARG | A:13 | A:170 | 118.0 | 0.524 | S | -98.4 | 97.9 | 118.0 | 0.524 | 0.0 |
HOH |
3.034 |
NH2 |
O |
||
| 1bxx | 1 | P84092 | 100.0 | 0.0 |
X-RAY |
1998-11-25 | ARG | A:20 | A:170 | 139.0 | 0.618 | S | -109.0 | 97.3 | 139.0 | 0.618 | 0.0 |
HOH |
2.701 |
NH2 |
O |
||
| 1hes | 1 | P20172 | 100.0 | 0.0 |
X-RAY |
2001-05-31 | ARG | A:20 | A:170 | 145.0 | 0.644 | S | -109.0 | 95.3 | 145.0 | 0.644 | 0.0 |
HOH |
4.449 |
O |
O |
||
| 6bnt | 1 | Q96CW1 | 99.28 | 0.0 |
X-RAY |
2018-11-21 | ARG | A:50 | A:170 | 147.0 | 0.653 | S | -97.8 | 121.4 | 147.0 | 0.653 | 0.0 |
HOH |
3.068 |
CD |
O |
||
| 5c7z | 1 | P84092 | 96.18 | 0.0 |
X-RAY |
2016-07-06 | ARG | A:12 | A:170 | 113.0 | 0.502 | S | -97.7 | 95.3 | 113.0 | 0.502 | 0.0 |
HOH |
3.619 |
C |
O |
||
| 1h6e | 1 | P20172 | 93.56 | 0.0 |
X-RAY |
2001-11-28 | ARG | A:23 | A:170 | 147.0 | 0.653 | S | -102.8 | 110.9 | 147.0 | 0.653 | 0.0 | ||||||
| 3ml6 | 1 | Q60838,P84092 | 100.0 | 0.0 |
X-RAY |
2010-08-11 | ARG | A:120 | A:1170 | 69.0 | 0.307 | -78.7 | 137.2 | 69.0 | 0.307 | 0.0 | |||||||
| ARG | B:120 | B:1170 | 73.0 | 0.324 | -67.7 | 141.5 | NA | NA | NA | ||||||||||||||
| ARG | C:120 | C:1170 | 83.0 | 0.369 | -72.7 | 147.7 | NA | NA | NA | ||||||||||||||
| ARG | D:120 | D:1170 | 75.0 | 0.333 | -83.3 | 143.5 | NA | NA | NA | ||||||||||||||
| ARG | E:120 | E:1170 | 61.0 | 0.271 | -72.2 | 140.3 | NA | NA | NA | ||||||||||||||
| ARG | F:120 | F:1170 | 73.0 | 0.324 | -75.1 | 134.3 | NA | NA | NA | ||||||||||||||
| 5wrk | 1 | P84092 | 86.69 | 1e-172 |
X-RAY |
2017-12-06 | ARG | A:13 | A:170 | 140.0 | 0.622 | S | -99.1 | 97.4 | 140.0 | 0.622 | 0.0 |
NI |
9.828 |
NE |
NI |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q96cw1-f1 | 1 | Q96CW1 | 100.0 | 0.0 | ARG | A:170 | A:170 | 154.0 | 0.684 | S | -142.5 | 132.8 | |