Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 3215853 . C A CCDS2562.1:NM_016302.3:c.267atG>atT_NP_057386.2:p.89M>I Homo sapiens cereblon (CRBN), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6bn7 2 Q96SW2 97.06 0.0 X-RAY
 2018-05-30 MET B:110 B:89 18.0 0.097 -88.5 152.7 18.0 0.097 0.0
6bn8 2 Q96SW2 97.06 0.0 X-RAY
 2018-06-06 MET B:110 B:89 14.0 0.076 -115.8 150.6 14.0 0.076 0.0
6bn9 2 Q96SW2 97.06 0.0 X-RAY
 2018-05-30 MET B:110 B:89 14.0 0.076 -95.4 148.6 14.0 0.076 0.0
6bnb 2 Q96SW2 97.06 0.0 X-RAY
 2018-05-30 MET B:110 B:89 93.0 0.503 S -61.3 140.2 93.0 0.503 0.0
6boy 2 Q96SW2 97.06 0.0 X-RAY
 2018-05-30 MET B:110 B:89 13.0 0.07 -93.3 149.2 13.0 0.07 0.0
5hxb 3 Q96SW2 99.75 0.0 X-RAY
 2016-06-29 MET C:53 Z:89 9.0 0.049 -174.3 145.8 9.0 0.049 0.0
MET E:53 C:89 8.0 0.043 -173.1 146.7 NA NA NA
5v3o 2 Q96SW2 99.75 0.0 X-RAY
 2017-05-03 MET B:53 C:89 9.0 0.049 -154.8 162.1 9.0 0.049 0.0
6uml 2 Q96SW2 99.75 0.0 X-RAY
 2020-04-15 MET B:53 C:89 13.0 0.07 -175.8 159.2 13.0 0.07 0.0
6xk9 3 Q96SW2 99.75 0.0 X-RAY
 2020-12-02 MET C:53 Z:89 11.0 0.059 -158.8 151.5 11.0 0.059 0.0
MET F:53 C:89 9.0 0.049 -157.8 151.9 NA NA NA
5fqd 2 Q96SW2 99.02 0.0 X-RAY
 2016-02-24 MET B:73 B:89 17.0 0.092 -72.9 152.0 17.0 0.092 0.0 HOH
 2.739
 O
 O
MET E:73 E:89 18.0 0.097 -75.4 152.0 NA NA NA
6h0f 2 Q96SW2 99.02 0.0 X-RAY
 2018-11-07 MET B:73 B:89 118.0 0.638 S -63.5 144.2 118.0 0.638 0.0
MET E:73 E:89 119.0 0.643 S -62.8 143.4 NA NA NA
MET H:73 H:89 119.0 0.643 S -62.8 143.3 NA NA NA
MET K:73 K:89 121.0 0.654 S -63.0 143.5 NA NA NA
6h0g 2 Q96SW2 99.02 0.0 X-RAY
 2018-11-07 MET B:73 B:89 10.0 0.054 -103.0 142.5 10.0 0.054 0.0
MET E:73 E:89 13.0 0.07 -103.3 142.5 NA NA NA
7lps 2 Q96SW2 100.0 0.0 X-RAY
 2021-06-02 MET B:43 B:89 12.0 0.065 -87.7 149.9 12.0 0.065 0.0
MET E:43 E:89 13.0 0.07 -87.9 150.1 NA NA NA
MET H:43 H:89 13.0 0.07 -86.3 150.7 NA NA NA
MET K:43 K:89 12.0 0.065 -87.5 150.3 NA NA NA
4tz4 2 Q96SW2 100.0 0.0 X-RAY
 2014-08-06 MET B:42 C:89 16.0 0.086 -174.4 162.9 16.0 0.086 0.0
4ci1 2 P0CF65 84.08 0.0 X-RAY
 2014-07-16 VAL B:114 B:90 23.0 0.148 S -81.3 155.0 23.0 0.148 0.0 HOH
 3.922
 CG1
 O
4ci2 2 P0CF65 84.08 0.0 X-RAY
 2014-07-16 VAL B:114 B:90 22.0 0.142 S -73.1 164.1 22.0 0.142 0.0
4ci3 2 P0CF65 84.08 0.0 X-RAY
 2014-07-16 VAL B:114 B:90 22.0 0.142 S -81.3 154.0 22.0 0.142 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q96sw2-f1 1 Q96SW2 100.0 0.0 MET A:89 A:89 12.0 0.065 S -144.8 159.3