Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 39107350 . G A CCDS33738.1:NM_020839.2:c.238Gac>Aac_NP_065890.1:p.80D>N Homo sapiens WD repeat domain 48 (WDR48), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5k1a 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 ASP B:80 B:80 13.0 0.087 E -149.3 152.3 13.0 0.087 0.0 HOH
 3.166
 CG
 O
ASP D:80 D:80 20.0 0.133 E -154.5 154.9 NA NA NA
ASP F:80 F:80 15.0 0.1 E -154.4 154.0 NA NA NA
ASP H:80 H:80 13.0 0.087 E -156.1 155.8 NA NA NA
5k1b 1 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 ASP A:80 B:80 24.0 0.16 E -164.9 143.0 24.0 0.16 0.0
7ay1 5 Q8TAF3 100.0 0.0 EM
 2021-03-24 ASP E:97 E:80 18.0 0.12 E -150.0 153.1 18.0 0.12 0.0
6jlq 2 Q8TAF3 100.0 0.0 X-RAY
 2019-07-10 ASP B:120 B:80 16.0 0.107 E -157.5 150.6 16.0 0.107 0.0
5cvl 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 ASP A:95 A:80 15.0 0.1 E -145.0 153.9 15.0 0.1 0.0 HOH
 3.670
 OD1
 O
5cvn 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 ASP A:95 A:80 13.0 0.087 E -150.7 150.4 13.0 0.087 0.0 HOH
 4.378
 OD2
 O
5l8e 1 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 ASP A:80 A:80 15.0 0.1 E -157.7 156.2 15.0 0.1 0.0 HOH
 2.831
 OD2
 O
ASP B:80 B:80 15.0 0.1 E -156.3 152.0 NA NA NA
5l8w 2 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 ASP B:80 B:80 8.0 0.053 E -150.0 145.4 8.0 0.053 0.0
5k1c 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 ASP B:80 B:80 13.0 0.087 E -160.6 154.0 13.0 0.087 0.0 HOH
 3.060
 CG
 O
7ay0 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 ASP A:80 A:80 19.0 0.127 E -149.0 153.2 19.0 0.127 0.0
ASP C:80 C:80 17.0 0.113 E -149.8 152.8 NA NA NA
7ay2 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 ASP A:80 A:80 20.0 0.133 E -149.9 153.1 20.0 0.133 0.0
ASP D:80 D:80 19.0 0.127 E -153.9 154.7 NA NA NA
5cvo 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 ASP A:80 A:80 16.0 0.107 E -144.4 153.9 16.0 0.107 0.0
ASP D:80 D:80 16.0 0.107 E -144.4 153.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8taf3-f1 1 Q8TAF3 100.0 0.0 ASP A:80 A:80 23.0 0.153 E -151.5 155.1