Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 39108267 . G A CCDS33738.1:NM_020839.2:c.382Gat>Aat_NP_065890.1:p.128D>N Homo sapiens WD repeat domain 48 (WDR48), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5k1a 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 ASP B:128 B:128 75.0 0.5 G -73.2 -14.2 75.0 0.5 0.0 HOH
 4.220
 CA
 O
ASP D:128 D:128 74.0 0.493 G -77.2 -18.0 NA NA NA
ASP F:128 F:128 78.0 0.52 G -65.6 -18.8 NA NA NA
ASP H:128 H:128 79.0 0.527 G -66.0 -16.4 NA NA NA
5k1b 1 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 ASP A:128 B:128 84.0 0.56 T -59.8 -61.4 84.0 0.56 0.0
7ay1 5 Q8TAF3 100.0 0.0 EM
 2021-03-24 ASP E:145 E:128 75.0 0.5 T -73.1 -14.4 75.0 0.5 0.0
6jlq 2 Q8TAF3 100.0 0.0 X-RAY
 2019-07-10 ASP B:168 B:128 89.0 0.593 T -69.4 -15.2 89.0 0.593 0.0
5cvl 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 ASP A:143 A:128 74.0 0.493 T -58.3 -66.8 74.0 0.493 0.0 AU
 8.118
 O
 AU
5cvn 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 ASP A:143 A:128 90.0 0.6 G -68.3 2.2 90.0 0.6 0.0 HOH
 7.833
 N
 O
5l8e 1 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 ASP A:128 A:128 89.0 0.593 G -63.5 -29.7 89.0 0.593 0.0 HOH
 8.267
 OD2
 O
ASP B:128 B:128 82.0 0.547 G -65.7 -20.6 NA NA NA
5l8w 2 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 ASP B:128 B:128 96.0 0.64 G -58.7 -39.1 96.0 0.64 0.0
5k1c 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 ASP B:128 B:128 92.0 0.613 G -63.6 -16.6 92.0 0.613 0.0 HOH
 9.828
 N
 O
7ay0 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 ASP A:128 A:128 95.0 0.633 G -73.0 -14.3 95.0 0.633 0.0
ASP C:128 C:128 89.0 0.593 G -73.2 -14.3 NA NA NA
7ay2 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 ASP A:128 A:128 95.0 0.633 G -73.5 -14.8 95.0 0.633 0.0
ASP D:128 D:128 85.0 0.567 T -77.6 -17.6 NA NA NA
5cvo 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 ASP A:128 A:128 78.0 0.52 T -57.5 -66.7 78.0 0.52 0.0
ASP D:128 D:128 81.0 0.54 T -57.6 -66.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8taf3-f1 1 Q8TAF3 100.0 0.0 ASP A:128 A:128 83.0 0.553 G -71.9 -15.1