Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 39108361 . T A CCDS33738.1:NM_020839.2:c.476gTc>gAc_NP_065890.1:p.159V>D Homo sapiens WD repeat domain 48 (WDR48), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5k1a 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 VAL B:159 B:159 75.0 0.484 -132.0 142.9 75.0 0.484 0.0 HOH
 3.560
 CG2
 O
VAL D:159 D:159 50.0 0.323 -118.9 163.4 NA NA NA
VAL F:159 F:159 70.0 0.452 -116.5 160.8 NA NA NA
VAL H:159 H:159 71.0 0.458 -118.5 151.2 NA NA NA
5k1b 1 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 VAL A:159 B:159 40.0 0.258 -140.3 160.4 40.0 0.258 0.0
7ay1 5 Q8TAF3 100.0 0.0 EM
 2021-03-24 VAL E:176 E:159 55.0 0.355 -131.9 145.0 7.0 0.045 0.31 A:Q9NVI1:0.31
6jlq 2 Q8TAF3 100.0 0.0 X-RAY
 2019-07-10 VAL B:199 B:159 46.0 0.297 -152.3 149.6 46.0 0.297 0.0
5cvl 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 VAL A:174 A:159 61.0 0.394 -124.0 119.1 61.0 0.394 0.0 HOH
 3.563
 CG2
 O
5cvn 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 VAL A:174 A:159 105.0 0.677 -50.6 82.7 105.0 0.677 0.0
5l8e 1 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 VAL A:159 A:159 55.0 0.355 -128.8 146.8 5.0 0.032 0.323 C:None:0.323
 GOL
HOH
 8.353
8.749
 CG1
CB
 O1
O
VAL B:159 B:159 60.0 0.387 -151.1 150.3 NA NA NA
5l8w 2 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 VAL B:159 B:159 127.0 0.819 -78.6 74.0 127.0 0.819 0.0
5k1c 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 VAL B:159 B:159 52.0 0.335 -118.1 146.8 52.0 0.335 0.0 HOH
 6.420
 CG2
 O
7ay0 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 VAL A:159 A:159 33.0 0.213 -132.1 141.9 33.0 0.213 0.0
VAL C:159 C:159 24.0 0.155 -131.7 142.2 NA NA NA
7ay2 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 VAL A:159 A:159 40.0 0.258 -73.2 141.8 40.0 0.258 0.0
VAL D:159 D:159 32.0 0.206 -74.1 161.6 NA NA NA
5cvo 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 VAL A:159 A:159 100.0 0.645 -52.6 118.1 100.0 0.645 0.0
VAL D:159 D:159 97.0 0.626 -52.6 118.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8taf3-f1 1 Q8TAF3 100.0 0.0 VAL A:159 A:159 44.0 0.284 -119.6 132.5