Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 39110298 . G A CCDS33738.1:NM_020839.2:c.518aGc>aAc_NP_065890.1:p.173S>N Homo sapiens WD repeat domain 48 (WDR48), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5k1a 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 SER B:173 B:173 6.0 0.052 E -157.5 165.8 6.0 0.052 0.0 HOH
 3.282
 CA
 O
SER D:173 D:173 7.0 0.061 E -151.5 165.6 NA NA NA
SER F:173 F:173 6.0 0.052 E -144.1 158.2 NA NA NA
SER H:173 H:173 5.0 0.043 E -145.7 158.7 NA NA NA
5k1b 1 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 SER A:173 B:173 4.0 0.035 E -150.2 159.9 4.0 0.035 0.0
7ay1 5 Q8TAF3 100.0 0.0 EM
 2021-03-24 SER E:190 E:173 7.0 0.061 E -158.1 165.4 7.0 0.061 0.0
6jlq 2 Q8TAF3 100.0 0.0 X-RAY
 2019-07-10 SER B:213 B:173 5.0 0.043 E -145.4 154.0 5.0 0.043 0.0
5cvl 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 SER A:188 A:173 4.0 0.035 E -143.1 149.9 4.0 0.035 0.0 HOH
 3.784
 CA
 O
5cvn 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 SER A:188 A:173 5.0 0.043 E -152.6 148.1 5.0 0.043 0.0 HOH
 3.645
 CB
 O
5l8e 1 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 SER A:173 A:173 5.0 0.043 E -150.0 146.1 5.0 0.043 0.0 HOH
 3.870
 CA
 O
SER B:173 B:173 5.0 0.043 E -148.6 151.6 NA NA NA
5l8w 2 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 SER B:173 B:173 5.0 0.043 E -143.5 154.0 5.0 0.043 0.0
5k1c 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 SER B:173 B:173 5.0 0.043 E -165.2 153.2 5.0 0.043 0.0 HOH
 4.804
 CB
 O
7ay0 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 SER A:173 A:173 6.0 0.052 E -156.9 165.3 6.0 0.052 0.0
SER C:173 C:173 5.0 0.043 E -157.1 165.3 NA NA NA
7ay2 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 SER A:173 A:173 6.0 0.052 E -156.5 165.4 6.0 0.052 0.0
SER D:173 D:173 6.0 0.052 E -151.7 165.1 NA NA NA
5cvo 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 SER A:173 A:173 4.0 0.035 E -142.7 150.2 4.0 0.035 0.0
SER D:173 D:173 4.0 0.035 E -142.7 150.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8taf3-f1 1 Q8TAF3 100.0 0.0 SER A:173 A:173 6.0 0.052 E -144.9 151.2