Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 39118635 . G A CCDS33738.1:NM_020839.2:c.903gaG>gaA_NP_065890.1:p.301E>E Homo sapiens WD repeat domain 48 (WDR48), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5k1a 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 GLU B:301 B:301 33.0 0.174 E -136.0 112.8 33.0 0.174 0.0 HOH
 2.506
 OE1
 O
GLU D:301 D:301 28.0 0.147 E -136.5 111.6 NA NA NA
GLU F:301 F:301 28.0 0.147 E -125.5 113.4 NA NA NA
GLU H:301 H:301 29.0 0.153 E -139.9 111.0 NA NA NA
5k1b 1 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 GLU A:301 B:301 30.0 0.158 E -133.9 127.6 30.0 0.158 0.0
7ay1 5 Q8TAF3 100.0 0.0 EM
 2021-03-24 GLU E:318 E:301 30.0 0.158 E -136.9 111.1 30.0 0.158 0.0
6jlq 2 Q8TAF3 100.0 0.0 X-RAY
 2019-07-10 GLU B:341 B:301 36.0 0.189 E -145.8 120.9 36.0 0.189 0.0
5cvl 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 GLU A:316 A:301 37.0 0.195 E -140.5 118.4 37.0 0.195 0.0 HOH
 2.833
 OE1
 O
5cvn 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 GLU A:316 A:301 39.0 0.205 E -144.9 122.0 39.0 0.205 0.0 HOH
 4.383
 OE1
 O
5l8e 1 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 GLU A:301 A:301 39.0 0.205 E -133.9 115.6 39.0 0.205 0.0 HOH
 2.778
 OE2
 O
GLU B:301 B:301 31.0 0.163 E -139.4 115.4 NA NA NA
5l8w 2 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 GLU B:301 B:301 38.0 0.2 E -130.4 118.0 38.0 0.2 0.0
5k1c 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 GLU B:301 B:301 37.0 0.195 E -150.8 121.2 37.0 0.195 0.0 HOH
 3.677
 OE2
 O
7ay0 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 GLU A:301 A:301 29.0 0.153 E -136.3 112.5 29.0 0.153 0.0
GLU C:301 C:301 28.0 0.147 E -136.3 112.6 NA NA NA
7ay2 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 GLU A:301 A:301 37.0 0.195 E -136.1 112.2 37.0 0.195 0.0
GLU D:301 D:301 36.0 0.189 E -136.8 111.7 NA NA NA
5cvo 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 GLU A:301 A:301 28.0 0.147 E -140.8 118.6 28.0 0.147 0.0
GLU D:301 D:301 27.0 0.142 E -140.8 118.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8taf3-f1 1 Q8TAF3 100.0 0.0 GLU A:301 A:301 23.0 0.121 E -139.2 121.0