Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 39118658 . C A CCDS33738.1:NM_020839.2:c.926cCt>cAt_NP_065890.1:p.309P>H Homo sapiens WD repeat domain 48 (WDR48), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5k1a 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 PRO B:309 B:309 6.0 0.041 -58.7 138.3 6.0 0.041 0.0 HOH
 3.689
 CD
 O
PRO D:309 D:309 6.0 0.041 -53.8 130.3 NA NA NA
PRO F:309 F:309 8.0 0.055 -53.4 128.0 NA NA NA
PRO H:309 H:309 9.0 0.062 -55.5 133.1 NA NA NA
5k1b 1 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 PRO A:309 B:309 6.0 0.041 -29.1 113.7 6.0 0.041 0.0
7ay1 5 Q8TAF3 100.0 0.0 EM
 2021-03-24 PRO E:326 E:309 11.0 0.076 -59.0 136.5 11.0 0.076 0.0
6jlq 2 Q8TAF3 100.0 0.0 X-RAY
 2019-07-10 PRO B:349 B:309 20.0 0.138 -66.2 117.4 20.0 0.138 0.0 GOL
 3.619
 CD
 O1
5cvl 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 PRO A:324 A:309 6.0 0.041 -49.4 127.1 6.0 0.041 0.0 AU
AU
HOH
 6.418
9.681
3.786
 CG
CG
CD
 AU
AU
O
5cvn 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 PRO A:324 A:309 6.0 0.041 -57.5 128.2 6.0 0.041 0.0
5l8e 1 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 PRO A:309 A:309 12.0 0.083 -67.3 126.3 12.0 0.083 0.0 HOH
 4.798
 CD
 O
PRO B:309 B:309 12.0 0.083 -64.6 130.0 NA NA NA
5l8w 2 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 PRO B:309 B:309 9.0 0.062 -64.8 114.7 9.0 0.062 0.0
5k1c 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 PRO B:309 B:309 11.0 0.076 -6.0 124.7 11.0 0.076 0.0
7ay0 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 PRO A:309 A:309 10.0 0.069 -58.4 136.3 10.0 0.069 0.0
PRO C:309 C:309 9.0 0.062 -58.1 136.6 NA NA NA
7ay2 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 PRO A:309 A:309 9.0 0.062 -58.0 135.8 9.0 0.062 0.0
PRO D:309 D:309 11.0 0.076 -54.2 128.7 NA NA NA
5cvo 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 PRO A:309 A:309 4.0 0.028 -50.2 127.3 4.0 0.028 0.0
PRO D:309 D:309 4.0 0.028 -50.3 127.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8taf3-f1 1 Q8TAF3 100.0 0.0 PRO A:309 A:309 7.0 0.048 -61.6 130.4