Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 39121247 . A C CCDS33738.1:NM_020839.2:c.1121cAt>cCt_NP_065890.1:p.374H>P Homo sapiens WD repeat domain 48 (WDR48), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5k1a 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 HIS B:374 B:374 30.0 0.154 E -112.6 153.9 30.0 0.154 0.0 HOH
 3.783
 CE1
 O
HIS D:374 D:374 31.0 0.159 E -120.8 152.6 NA NA NA
HIS F:374 F:374 31.0 0.159 E -107.7 154.6 NA NA NA
HIS H:374 H:374 29.0 0.149 E -118.7 150.0 NA NA NA
5k1b 1 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 HIS A:374 B:374 29.0 0.149 E -140.5 151.7 29.0 0.149 0.0
7ay1 5 Q8TAF3 100.0 0.0 EM
 2021-03-24 HIS E:391 E:374 27.0 0.138 E -113.2 154.4 27.0 0.138 0.0
6jlq 2 Q8TAF3 100.0 0.0 X-RAY
 2019-07-10 HIS B:414 B:374 29.0 0.149 E -103.6 140.8 29.0 0.149 0.0
5cvl 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 HIS A:389 A:374 23.0 0.118 E -100.8 145.4 23.0 0.118 0.0 AU
AU
HOH
 9.961
8.159
3.842
 O
O
NE2
 AU
AU
O
5cvn 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 HIS A:389 A:374 30.0 0.154 E -105.6 152.9 30.0 0.154 0.0 HOH
 7.579
 O
 O
5l8e 1 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 HIS A:374 A:374 31.0 0.159 E -97.4 150.9 31.0 0.159 0.0 HOH
 6.337
 ND1
 O
HIS B:374 B:374 32.0 0.164 E -99.5 154.1 NA NA NA
5l8w 2 Q8TAF3 99.48 0.0 X-RAY
 2016-09-28 HIS B:374 B:374 31.0 0.159 E -117.2 146.3 31.0 0.159 0.0
5k1c 2 Q8TAF3 100.0 0.0 X-RAY
 2016-07-20 HIS B:374 B:374 33.0 0.169 E -92.9 130.5 33.0 0.169 0.0 HOH
 7.868
 O
 O
7ay0 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 HIS A:374 A:374 28.0 0.144 E -113.0 154.2 28.0 0.144 0.0
HIS C:374 C:374 29.0 0.149 E -113.3 153.7 NA NA NA
7ay2 1 Q8TAF3 100.0 0.0 X-RAY
 2021-03-24 HIS A:374 A:374 30.0 0.154 E -113.3 154.0 30.0 0.154 0.0
HIS D:374 D:374 30.0 0.154 E -118.4 152.4 NA NA NA
5cvo 1 Q8TAF3 100.0 0.0 X-RAY
 2015-10-07 HIS A:374 A:374 26.0 0.133 E -102.1 145.4 26.0 0.133 0.0
HIS D:374 D:374 30.0 0.154 E -101.6 145.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8taf3-f1 1 Q8TAF3 100.0 0.0 HIS A:374 A:374 25.0 0.128 E -101.0 143.1