Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 39133129 | . | A | C | CCDS33738.1:NM_020839.2:c.1682aAa>aCa_NP_065890.1:p.561K>T | Homo sapiens WD repeat domain 48 (WDR48), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5k1a | 2 | Q8TAF3 | 100.0 | 0.0 |
X-RAY |
2016-07-20 | LYS | B:561 | B:561 | 175.0 | 0.875 | -54.3 | 140.9 | 175.0 | 0.875 | 0.0 |
HOH |
2.598 |
O |
O |
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| LYS | D:561 | D:561 | 169.0 | 0.845 | -63.7 | 139.4 | NA | NA | NA | ||||||||||||||
| LYS | F:561 | F:561 | 152.0 | 0.76 | -55.6 | 144.4 | NA | NA | NA | ||||||||||||||
| LYS | H:561 | H:561 | 168.0 | 0.84 | -61.3 | 138.5 | NA | NA | NA | ||||||||||||||
| 5k1b | 1 | Q8TAF3 | 100.0 | 0.0 |
X-RAY |
2016-07-20 | LYS | A:561 | B:561 | 185.0 | 0.925 | -41.4 | 141.3 | 185.0 | 0.925 | 0.0 | |||||||
| 7ay1 | 5 | Q8TAF3 | 100.0 | 0.0 |
EM |
2021-03-24 | LYS | E:578 | E:561 | 175.0 | 0.875 | -55.0 | 140.3 | 170.0 | 0.85 | 0.025 |
A:Q9NVI1:0.025 |
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| 6jlq | 2 | Q8TAF3 | 100.0 | 0.0 |
X-RAY |
2019-07-10 | LYS | B:601 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 5cvl | 1 | Q8TAF3 | 100.0 | 0.0 |
X-RAY |
2015-10-07 | LYS | A:576 | A:561 | 158.0 | 0.79 | -87.8 | 125.7 | 158.0 | 0.79 | 0.0 | |||||||
| 5cvn | 1 | Q8TAF3 | 100.0 | 0.0 |
X-RAY |
2015-10-07 | LYS | A:576 | A:561 | 190.0 | 0.95 | -98.1 | 144.7 | 190.0 | 0.95 | 0.0 | |||||||
| 5l8e | 1 | Q8TAF3 | 99.48 | 0.0 |
X-RAY |
2016-09-28 | LYS | A:561 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| LYS | B:561 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5l8w | 2 | Q8TAF3 | 99.48 | 0.0 |
X-RAY |
2016-09-28 | LYS | B:561 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 5k1c | 2 | Q8TAF3 | 100.0 | 0.0 |
X-RAY |
2016-07-20 | LYS | B:561 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 7ay0 | 1 | Q8TAF3 | 100.0 | 0.0 |
X-RAY |
2021-03-24 | LYS | A:561 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| LYS | C:561 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 7ay2 | 1 | Q8TAF3 | 100.0 | 0.0 |
X-RAY |
2021-03-24 | LYS | A:561 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| LYS | D:561 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5cvo | 1 | Q8TAF3 | 100.0 | 0.0 |
X-RAY |
2015-10-07 | LYS | A:561 | A:561 | 185.0 | 0.925 | -89.1 | -170.8 | 185.0 | 0.925 | 0.0 | |||||||
| LYS | D:561 | D:561 | 178.0 | 0.89 | -89.3 | 127.9 | NA | NA | NA | ||||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q8taf3-f1 | 1 | Q8TAF3 | 100.0 | 0.0 | LYS | A:561 | A:561 | 191.0 | 0.955 | -76.7 | 152.3 | ||