Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 48636584 . C A CCDS2774.1:NM_003365.2:c.1420Ggc>Tgc_NP_003356.2:p.474G>C Homo sapiens ubiquinol-cytochrome c reductase core protein I (UQCRC1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5xte 11 P31930 100.0 0.0 EM
 2017-08-30 GLY K:440 L:474 16.0 0.213 G -83.2 -6.2 16.0 0.213 0.0 PLX
CDL
PEE
 8.514
6.470
4.118
 N
CA
CA
 O3
OA4
N
GLY V:440 Y:474 23.0 0.307 T -82.9 -3.1 23.0 0.307 0.0 PLX
CDL
PEE
 8.682
5.586
4.455
 N
CA
CA
 O3
OA4
N
5xth 68 P31930 100.0 0.0 EM
 2017-09-13 GLY QB:440 AL:474 16.0 0.213 G -83.2 -6.3 16.0 0.213 0.0 PLX
CDL
PEE
 8.514
6.470
4.119
 N
CA
CA
 O3
OA4
N
GLY BC:440 AY:474 23.0 0.307 T -83.0 -3.1 23.0 0.307 0.0 PLX
CDL
PEE
 8.682
5.586
4.454
 N
CA
CA
 O3
OA4
N
5xti 68 P31930 100.0 0.0 EM
 2017-09-13 GLY QB:440 AL:474 17.0 0.227 G -83.1 -6.3 17.0 0.227 0.0 PLX
CDL
PEE
 8.514
6.470
4.120
 N
CA
CA
 O3
OA4
N
GLY BC:440 AY:474 23.0 0.307 T -83.0 -3.1 23.0 0.307 0.0 PLX
CDL
PEE
 8.681
5.587
4.454
 N
CA
CA
 O3
OA4
N
1sqb 1 P31800 89.17 0.0 X-RAY
 2004-09-07 GLY A:474 A:440 20.0 0.267 T -73.5 -4.9 20.0 0.267 0.0 HOH
 3.923
 CA
 O
1sqp 1 P31800 89.17 0.0 X-RAY
 2005-11-01 GLY A:474 A:440 19.0 0.253 T -69.3 -4.5 19.0 0.253 0.0 CDL
PEE
PLX
 5.554
4.612
9.197
 CA
N
N
 OA4
C5
O3
4d6t 1 P31800 89.17 0.0 X-RAY
 2015-01-14 GLY A:474 A:440 22.0 0.293 T -71.3 -11.1 22.0 0.293 0.0 PO4
PO4
 6.427
9.174
 N
N
 O3
O2
GLY K:474 N:440 22.0 0.293 T -72.7 -8.3 NA NA NA
4d6u 1 P31800 89.17 0.0 X-RAY
 2015-01-14 GLY A:474 A:440 14.0 0.187 T -73.8 -2.1 14.0 0.187 0.0 PO4
PO4
 6.502
9.042
 N
N
 O3
O2
6fo0 1 P31800 89.17 0.0 EM
 2018-02-28 GLY A:474 N:440 20.0 0.267 T -85.7 7.1 20.0 0.267 0.0
GLY K:474 A:440 20.0 0.267 T -85.6 6.9 20.0 0.267 0.0
6fo2 1 P31800 89.17 0.0 EM
 2018-02-28 GLY A:474 N:440 24.0 0.32 T -81.0 0.4 24.0 0.32 0.0
GLY K:474 A:440 25.0 0.333 T -81.1 0.5 25.0 0.333 0.0
6fo6 2 P31800 89.17 0.0 EM
 2018-02-28 GLY B:474 A:440 21.0 0.28 T -86.7 -2.6 21.0 0.28 0.0
GLY K:474 N:440 21.0 0.28 T -86.7 -2.6 21.0 0.28 0.0
4d6u 10 P31800 88.96 0.0 X-RAY
 2015-01-14 GLY K:474 N:440 22.0 0.293 T -72.4 -3.3 NA NA NA
5okd 1 P31800 88.75 0.0 X-RAY
 2018-02-28 GLY A:474 A:440 22.0 0.293 T -75.9 -0.4 22.0 0.293 0.0 6PE
CDL
PX4
HOH
 4.694
6.094
8.913
5.685
 N
CA
N
CA
 C17
OB4
O1
O
5gup 45 F1SKM0 88.75 0.0 EM
 2017-03-29 GLY UA:474 u:474 20.0 0.267 T -81.1 -10.4 20.0 0.267 0.0 CDL
PEE
PLX
 6.155
4.035
8.161
 CA
CA
N
 O1
N
O3
GLY FB:474 5:474 17.0 0.227 T -83.2 0.2 17.0 0.227 0.0 PLX
CDL
PEE
 9.392
6.602
4.655
 N
CA
N
 C1B
OA4
N
5j7y 51 W5Q5G6 91.48 0.0 EM
 2016-09-21 GLY CB:440 AA:440 39.0 0.52 T -59.1 -20.8 39.0 0.52 0.0
GLY NB:440 AL:440 39.0 0.52 T -59.1 -20.8 39.0 0.52 0.0
5j8k 51 W5Q5G6 91.48 0.0 EM
 2016-09-21 GLY CB:440 AA:440 39.0 0.52 T -59.1 -20.9 39.0 0.52 0.0
GLY NB:440 AL:440 40.0 0.533 T -59.2 -20.8 40.0 0.533 0.0
6q9e 1 W5Q5G6 91.48 0.0 EM
 2019-08-21 GLY A:440 a1:440 23.0 0.307 H -88.8 -11.1 23.0 0.307 0.0
GLY K:440 a3:440 31.0 0.413 H -83.3 -10.7 31.0 0.413 0.0
6qbx 1 W5Q5G6 91.48 0.0 EM
 2019-08-21 GLY A:440 a1:440 29.0 0.387 H -107.5 -4.6 29.0 0.387 0.0
GLY K:440 a3:440 24.0 0.32 H -76.7 -11.5 24.0 0.32 0.0
6qc2 29 ? 91.48 0.0 EM
 2019-08-21 GLY CA:440 a1:440 26.0 0.347 T -93.3 -4.6 26.0 0.347 0.0
GLY MA:440 a3:440 27.0 0.36 H -73.0 -21.1 27.0 0.36 0.0
6qc3 1 ? 91.48 0.0 EM
 2019-08-21 GLY A:440 a1:440 31.0 0.413 H -90.9 1.2 31.0 0.413 0.0
GLY K:440 a3:440 25.0 0.333 H -79.2 -19.6 25.0 0.333 0.0
6qc4 1 ? 91.48 0.0 EM
 2019-08-21 GLY A:440 a1:440 29.0 0.387 H -75.7 -5.1 29.0 0.387 0.0
GLY K:440 a3:440 22.0 0.293 T -80.3 -1.8 22.0 0.293 0.0
5j4z 51 W5Q5G6 90.87 0.0 EM
 2016-09-21 GLY CB:443 AA:440 40.0 0.533 T -59.1 -20.8 40.0 0.533 0.0
GLY NB:443 AL:440 38.0 0.507 T -59.1 -20.8 38.0 0.507 0.0
1be3 1 P31800 90.36 0.0 X-RAY
 1999-01-13 GLY A:440 A:440 16.0 0.213 G -80.2 -14.0 16.0 0.213 0.0
1bgy 1 P31800 90.36 0.0 X-RAY
 1999-01-06 GLY A:440 A:440 20.0 0.267 G -81.7 -11.3 20.0 0.267 0.0
GLY L:440 M:440 17.0 0.227 G -74.3 -22.0 17.0 0.227 0.0
1l0l 1 P31800 90.36 0.0 X-RAY
 2003-04-08 GLY A:440 A:440 20.0 0.267 T -76.5 -5.8 20.0 0.267 0.0
1l0n 1 P31800 90.36 0.0 X-RAY
 2003-04-08 GLY A:440 A:440 22.0 0.293 T -90.5 1.1 22.0 0.293 0.0
1ntk 1 P31800 90.36 0.0 X-RAY
 2003-10-07 GLY A:440 A:440 21.0 0.28 T -72.5 0.4 21.0 0.28 0.0 HOH
 2.938
 O
 O
1ntm 1 P31800 90.36 0.0 X-RAY
 2003-10-07 GLY A:440 A:440 23.0 0.307 T -73.7 6.1 23.0 0.307 0.0 HOH
 2.544
 O
 O
1ntz 1 P31800 90.36 0.0 X-RAY
 2003-10-07 GLY A:440 A:440 20.0 0.267 T -86.0 -2.3 20.0 0.267 0.0 HOH
 7.713
 N
 O
1nu1 1 P31800 90.36 0.0 X-RAY
 2003-10-07 GLY A:440 A:440 24.0 0.32 T -76.5 -1.3 24.0 0.32 0.0
1pp9 1 P31800 90.36 0.0 X-RAY
 2004-07-20 GLY A:440 A:440 23.0 0.307 T -78.3 -5.4 23.0 0.307 0.0 PEE
HOH
 6.668
2.783
 N
O
 O3P
O
GLY K:440 N:440 23.0 0.307 T -78.2 -7.5 23.0 0.307 0.0 PEE
HOH
 6.497
2.685
 N
O
 O4P
O
1ppj 1 P31800 90.36 0.0 X-RAY
 2004-07-20 GLY A:440 A:440 22.0 0.293 T -75.4 -10.6 22.0 0.293 0.0 PO4
HOH
 6.639
2.623
 N
O
 O1
O
GLY K:440 N:440 22.0 0.293 T -73.9 -11.0 22.0 0.293 0.0 PO4
HOH
 6.432
4.804
 N
CA
 O2
O
1sqq 1 P31800 90.36 0.0 X-RAY
 2005-10-25 GLY A:440 A:440 20.0 0.267 T -78.0 3.6 20.0 0.267 0.0 HOH
 7.601
 N
 O
1sqv 1 P31800 90.36 0.0 X-RAY
 2005-09-06 GLY A:440 A:440 21.0 0.28 T -53.4 -13.2 21.0 0.28 0.0 HOH
 6.324
 CA
 O
1sqx 1 P31800 90.36 0.0 X-RAY
 2005-09-06 GLY A:440 A:440 17.0 0.227 T -69.8 -4.8 17.0 0.227 0.0 HOH
 2.721
 O
 O
2a06 1 P31800 90.36 0.0 X-RAY
 2005-06-21 GLY A:440 A:440 25.0 0.333 T -70.5 -4.6 25.0 0.333 0.0 PO4
UNL
UNL
HOH
 6.579
6.198
7.013
2.632
 N
CA
O
O
 P
O1
O1
O
GLY K:440 N:440 24.0 0.32 T -70.0 -6.2 24.0 0.32 0.0 PO4
HOH
 6.257
2.613
 N
O
 O3
O
2fyu 1 P31800 90.36 0.0 X-RAY
 2006-08-29 GLY A:440 A:440 18.0 0.24 T -66.4 -8.8 18.0 0.24 0.0 HOH
 8.096
 N
 O
2ybb 9 P31800 90.36 0.0 EM
 2011-10-19 GLY I:440 A:440 24.0 0.32 T -78.3 -5.4 24.0 0.32 0.0 HOH
 2.784
 O
 O
GLY HA:440 a:440 23.0 0.307 T -78.3 -7.4 23.0 0.307 0.0 HOH
 2.686
 O
 O
5gpn 1 P31800 90.36 0.0 EM
 2017-04-05 GLY A:440 A:440 30.0 0.4 G -81.7 -11.3 30.0 0.4 0.0
GLY M:440 M:440 27.0 0.36 G -74.3 -22.0 27.0 0.36 0.0
5klv 1 P31800 90.36 0.0 X-RAY
 2016-10-12 GLY A:440 A:440 18.0 0.24 T -74.3 -7.2 18.0 0.24 0.0 6PE
CDL
PX4
 3.466
5.262
8.842
 HA2
HA2
N
 H30
OB4
H4
5luf 1 P31800 90.36 0.0 EM
 2016-11-30 GLY A:440 c:440 19.0 0.253 G -81.6 -11.4 19.0 0.253 0.0
GLY L:440 l:440 19.0 0.253 G -74.3 -22.0 19.0 0.253 0.0
6nhg 1 P31800 90.36 0.0 X-RAY
 2019-06-19 GLY A:440 A:440 17.0 0.227 T -73.2 -2.8 17.0 0.227 0.0 6PE
CDL
MC3
 3.478
5.264
8.616
 HA2
HA2
N
 H33
HA21
H52
6xvf 1 P31800 90.34 0.0 X-RAY
 2020-07-22 GLY A:439 A:440 22.0 0.293 T -74.4 -0.6 22.0 0.293 0.0 6PE
CDL
PX4
HOH
 4.645
5.881
8.962
5.720
 N
CA
N
CA
 C17
OB4
O1
O
5nmi 1 P31800 90.32 0.0 X-RAY
 2017-06-14 GLY A:439 A:440 21.0 0.28 H -71.9 -15.3 21.0 0.28 0.0 CDL
PEE
 5.677
9.143
 N
N
 OB3
O4P
GLY L:439 N:440 20.0 0.267 H -72.5 -14.2 20.0 0.267 0.0 CDL
PEE
 5.715
9.041
 N
N
 OB3
O1P
6zft 1 P31800 90.09 0.0 X-RAY
 2021-06-30 GLY A:438 A:440 21.0 0.28 T -72.8 -0.8 21.0 0.28 0.0 6PE
PG4
CDL
PX4
 4.755
3.306
5.970
9.429
 N
CA
CA
N
 C17
O5
OB4
O1
6zfs 1 P31800 89.86 0.0 X-RAY
 2021-06-30 GLY A:439 A:440 22.0 0.293 T -77.0 2.1 22.0 0.293 0.0 6PE
CDL
PX4
HOH
 4.709
6.176
8.963
5.828
 N
CA
N
CA
 C17
OB4
O1
O
6zfu 1 P31800 89.86 0.0 X-RAY
 2021-06-30 GLY A:439 A:440 22.0 0.293 T -77.9 0.8 22.0 0.293 0.0 6PE
CDL
PX4
HOH
 4.614
5.936
9.130
5.743
 N
CA
N
CA
 C17
OB4
O1
O
7o37 1 Q9CZ13 89.46 0.0 EM
 2021-10-13 GLY A:440 A:440 17.0 0.227 H -73.2 -11.2 17.0 0.227 0.0 3PE
CDL
PC1
 4.152
6.073
8.786
 CA
CA
N
 N
OA3
O14
GLY K:440 L:440 16.0 0.213 T -79.0 -3.3 16.0 0.213 0.0 3PE
CDL
PC1
 4.703
6.880
8.740
 CA
CA
N
 N
CA3
O12
7o3c 1 Q9CZ13 89.46 0.0 EM
 2021-10-13 GLY A:440 A:440 21.0 0.28 T -75.5 -6.7 21.0 0.28 0.0 3PE
CDL
PC1
 4.241
6.578
9.025
 CA
CA
N
 N
OA2
O14
GLY K:440 L:440 17.0 0.227 H -75.1 -11.9 17.0 0.227 0.0 3PE
CDL
PC1
 4.482
6.260
8.681
 CA
CA
N
 N
OA3
O12
7o3e 1 Q9CZ13 89.46 0.0 EM
 2021-10-13 GLY A:440 A:440 18.0 0.24 H -75.3 -10.8 18.0 0.24 0.0
GLY H:440 L:440 24.0 0.32 H -73.4 -13.2 24.0 0.32 0.0 PC1
3PE
CDL
 9.463
4.826
5.903
 N
N
CA
 O13
N
O1
7o3h 1 Q9CZ13 89.46 0.0 EM
 2021-10-13 GLY A:440 A:440 17.0 0.227 H -74.3 -10.2 17.0 0.227 0.0 3PE
CDL
PC1
 4.343
6.009
8.715
 CA
CA
N
 N
OA3
O14
GLY K:440 L:440 22.0 0.293 H -75.0 -8.8 22.0 0.293 0.0 3PE
CDL
PC1
 4.328
5.846
8.516
 CA
CA
N
 N
OA3
O12
6haw 1 P31800 89.19 0.0 X-RAY
 2019-01-16 GLY A:433 A:440 22.0 0.293 T -76.5 1.1 22.0 0.293 0.0 6PE
PO4
CDL
PX4
HOH
 4.800
4.516
6.037
9.095
8.067
 N
CA
CA
N
N
 C17
O3
OB4
O1
O
1bcc 1 P13272 87.22 0.0 X-RAY
 1998-08-19 GLY A:440 A:440 23.0 0.307 T -104.6 17.2 23.0 0.307 0.0 PEE
 8.973
 N
 O1P
2bcc 1 ? 87.22 0.0 X-RAY
 1999-08-02 GLY A:440 A:440 23.0 0.307 T -79.5 -6.5 23.0 0.307 0.0 PEE
 8.779
 N
 O1P
3bcc 1 P31800 87.22 0.0 X-RAY
 1998-08-19 GLY A:440 A:440 23.0 0.307 T -99.5 1.0 23.0 0.307 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p31930-f1 1 P31930 100.0 0.0 GLY A:474 A:474 19.0 0.253 T -74.0 -8.8