Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 48638120 | . | C | A | CCDS2774.1:NM_003365.2:c.1120Ggg>Tgg_NP_003356.2:p.374G>W | Homo sapiens ubiquinol-cytochrome c reductase core protein I (UQCRC1), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5xte | 11 | P31930 | 100.0 | 0.0 |
EM |
2017-08-30 | GLY | K:340 | L:374 | 21.0 | 0.28 | H | -63.9 | -38.0 | 21.0 | 0.28 | 0.0 |
CDL PEE |
7.199 9.021 |
CA N |
O1 N |
||
GLY | V:340 | Y:374 | 21.0 | 0.28 | H | -65.0 | -37.8 | 21.0 | 0.28 | 0.0 |
PLX CDL PEE |
7.122 7.236 9.551 |
O CA CA |
O2 O1 N |
|||||||||
5xth | 68 | P31930 | 100.0 | 0.0 |
EM |
2017-09-13 | GLY | QB:340 | AL:374 | 20.0 | 0.267 | H | -63.9 | -38.0 | 20.0 | 0.267 | 0.0 |
CDL PEE |
7.199 9.022 |
CA N |
O1 N |
||
GLY | BC:340 | AY:374 | 21.0 | 0.28 | H | -65.1 | -37.7 | 21.0 | 0.28 | 0.0 |
PLX CDL PEE |
7.123 7.235 9.551 |
O CA CA |
O2 O1 N |
|||||||||
5xti | 68 | P31930 | 100.0 | 0.0 |
EM |
2017-09-13 | GLY | QB:340 | AL:374 | 21.0 | 0.28 | H | -63.9 | -38.0 | 21.0 | 0.28 | 0.0 |
CDL PEE |
7.199 9.022 |
CA N |
O1 N |
||
GLY | BC:340 | AY:374 | 20.0 | 0.267 | H | -65.1 | -37.7 | 20.0 | 0.267 | 0.0 |
PLX CDL PEE |
7.122 7.235 9.551 |
O CA CA |
O2 O1 N |
|||||||||
1sqb | 1 | P31800 | 89.17 | 0.0 |
X-RAY |
2004-09-07 | GLY | A:374 | A:340 | 17.0 | 0.227 | H | -60.1 | -31.9 | 17.0 | 0.227 | 0.0 |
HOH |
3.398 |
C |
O |
||
1sqp | 1 | P31800 | 89.17 | 0.0 |
X-RAY |
2005-11-01 | GLY | A:374 | A:340 | 18.0 | 0.24 | H | -64.7 | -35.9 | 18.0 | 0.24 | 0.0 |
CDL PEE HOH |
7.135 9.035 7.817 |
CA CA C |
O1 N O |
||
4d6t | 1 | P31800 | 89.17 | 0.0 |
X-RAY |
2015-01-14 | GLY | A:374 | A:340 | 21.0 | 0.28 | H | -43.0 | -52.1 | 21.0 | 0.28 | 0.0 | ||||||
GLY | K:374 | N:340 | 22.0 | 0.293 | H | -42.6 | -49.3 | NA | NA | NA | |||||||||||||
4d6u | 1 | P31800 | 89.17 | 0.0 |
X-RAY |
2015-01-14 | GLY | A:374 | A:340 | 27.0 | 0.36 | H | -42.8 | -49.6 | 27.0 | 0.36 | 0.0 | ||||||
6fo0 | 1 | P31800 | 89.17 | 0.0 |
EM |
2018-02-28 | GLY | A:374 | N:340 | 20.0 | 0.267 | H | -61.3 | -31.3 | 20.0 | 0.267 | 0.0 | ||||||
GLY | K:374 | A:340 | 20.0 | 0.267 | H | -61.4 | -31.2 | 20.0 | 0.267 | 0.0 | |||||||||||||
6fo2 | 1 | P31800 | 89.17 | 0.0 |
EM |
2018-02-28 | GLY | A:374 | N:340 | 26.0 | 0.347 | H | -61.0 | -20.3 | 26.0 | 0.347 | 0.0 | ||||||
GLY | K:374 | A:340 | 28.0 | 0.373 | H | -61.0 | -20.3 | 28.0 | 0.373 | 0.0 | |||||||||||||
6fo6 | 2 | P31800 | 89.17 | 0.0 |
EM |
2018-02-28 | GLY | B:374 | A:340 | 19.0 | 0.253 | H | -65.6 | -40.0 | 19.0 | 0.253 | 0.0 | ||||||
GLY | K:374 | N:340 | 19.0 | 0.253 | H | -65.5 | -40.0 | 19.0 | 0.253 | 0.0 | |||||||||||||
4d6u | 10 | P31800 | 88.96 | 0.0 |
X-RAY |
2015-01-14 | GLY | K:374 | N:340 | 22.0 | 0.293 | H | -41.3 | -47.7 | NA | NA | NA | ||||||
5okd | 1 | P31800 | 88.75 | 0.0 |
X-RAY |
2018-02-28 | GLY | A:374 | A:340 | 20.0 | 0.267 | H | -62.3 | -36.8 | 20.0 | 0.267 | 0.0 |
6PE CDL HOH |
9.687 8.215 7.987 |
CA CA N |
N1 O1 O |
||
5gup | 45 | F1SKM0 | 88.75 | 0.0 |
EM |
2017-03-29 | GLY | UA:374 | u:374 | 19.0 | 0.253 | H | -63.2 | -36.6 | 19.0 | 0.253 | 0.0 |
CDL PEE |
7.757 8.792 |
CA N |
O1 N |
||
GLY | FB:374 | 5:374 | 20.0 | 0.267 | H | -63.4 | -37.1 | 20.0 | 0.267 | 0.0 |
CDL PEE |
6.747 9.168 |
CA N |
O1 N |
|||||||||
5j7y | 51 | W5Q5G6 | 91.48 | 0.0 |
EM |
2016-09-21 | GLY | CB:340 | AA:340 | 25.0 | 0.333 | H | -59.8 | -49.2 | 25.0 | 0.333 | 0.0 | ||||||
GLY | NB:340 | AL:340 | 26.0 | 0.347 | H | -60.0 | -49.0 | 26.0 | 0.347 | 0.0 | |||||||||||||
5j8k | 51 | W5Q5G6 | 91.48 | 0.0 |
EM |
2016-09-21 | GLY | CB:340 | AA:340 | 26.0 | 0.347 | H | -59.8 | -49.2 | 26.0 | 0.347 | 0.0 | ||||||
GLY | NB:340 | AL:340 | 25.0 | 0.333 | H | -59.9 | -49.0 | 25.0 | 0.333 | 0.0 | |||||||||||||
6q9e | 1 | W5Q5G6 | 91.48 | 0.0 |
EM |
2019-08-21 | GLY | A:340 | a1:340 | 22.0 | 0.293 | H | -63.9 | -40.3 | 22.0 | 0.293 | 0.0 | ||||||
GLY | K:340 | a3:340 | 32.0 | 0.427 | H | -63.7 | -36.5 | 32.0 | 0.427 | 0.0 | |||||||||||||
6qbx | 1 | W5Q5G6 | 91.48 | 0.0 |
EM |
2019-08-21 | GLY | A:340 | a1:340 | 13.0 | 0.173 | H | -67.7 | -35.6 | 13.0 | 0.173 | 0.0 | ||||||
GLY | K:340 | a3:340 | 29.0 | 0.387 | H | -67.9 | -34.8 | 29.0 | 0.387 | 0.0 | |||||||||||||
6qc2 | 29 | ? | 91.48 | 0.0 |
EM |
2019-08-21 | GLY | CA:340 | a1:340 | 20.0 | 0.267 | H | -65.2 | -37.1 | 20.0 | 0.267 | 0.0 | ||||||
GLY | MA:340 | a3:340 | 35.0 | 0.467 | H | -66.5 | -38.4 | 35.0 | 0.467 | 0.0 | |||||||||||||
6qc3 | 1 | ? | 91.48 | 0.0 |
EM |
2019-08-21 | GLY | A:340 | a1:340 | 20.0 | 0.267 | H | -65.5 | -40.5 | 20.0 | 0.267 | 0.0 | ||||||
GLY | K:340 | a3:340 | 35.0 | 0.467 | H | -64.1 | -40.5 | 35.0 | 0.467 | 0.0 | |||||||||||||
6qc4 | 1 | ? | 91.48 | 0.0 |
EM |
2019-08-21 | GLY | A:340 | a1:340 | 24.0 | 0.32 | H | -64.4 | -41.6 | 24.0 | 0.32 | 0.0 | ||||||
GLY | K:340 | a3:340 | 32.0 | 0.427 | H | -65.6 | -42.1 | 32.0 | 0.427 | 0.0 | |||||||||||||
5j4z | 51 | W5Q5G6 | 90.87 | 0.0 |
EM |
2016-09-21 | GLY | CB:343 | AA:340 | 27.0 | 0.36 | H | -59.8 | -49.2 | 27.0 | 0.36 | 0.0 | ||||||
GLY | NB:343 | AL:340 | 25.0 | 0.333 | H | -59.9 | -49.1 | 25.0 | 0.333 | 0.0 | |||||||||||||
1be3 | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
1999-01-13 | GLY | A:340 | A:340 | 12.0 | 0.16 | H | -72.1 | -29.0 | 12.0 | 0.16 | 0.0 | ||||||
1bgy | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
1999-01-06 | GLY | A:340 | A:340 | 14.0 | 0.187 | H | -57.8 | -40.5 | 14.0 | 0.187 | 0.0 | ||||||
GLY | L:340 | M:340 | 15.0 | 0.2 | H | -64.5 | -37.8 | 15.0 | 0.2 | 0.0 | |||||||||||||
1l0l | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2003-04-08 | GLY | A:340 | A:340 | 19.0 | 0.253 | H | -64.7 | -37.6 | 19.0 | 0.253 | 0.0 | ||||||
1l0n | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2003-04-08 | GLY | A:340 | A:340 | 13.0 | 0.173 | H | -61.0 | -43.1 | 13.0 | 0.173 | 0.0 | ||||||
1ntk | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2003-10-07 | GLY | A:340 | A:340 | 20.0 | 0.267 | H | -61.3 | -32.3 | 20.0 | 0.267 | 0.0 |
HOH |
4.269 |
N |
O |
||
1ntm | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2003-10-07 | GLY | A:340 | A:340 | 15.0 | 0.2 | H | -54.9 | -41.9 | 15.0 | 0.2 | 0.0 |
HOH |
3.266 |
CA |
O |
||
1ntz | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2003-10-07 | GLY | A:340 | A:340 | 14.0 | 0.187 | H | -63.9 | -34.7 | 14.0 | 0.187 | 0.0 | ||||||
1nu1 | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2003-10-07 | GLY | A:340 | A:340 | 19.0 | 0.253 | H | -57.2 | -31.2 | 19.0 | 0.253 | 0.0 | ||||||
1pp9 | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2004-07-20 | GLY | A:340 | A:340 | 32.0 | 0.427 | H | -64.4 | -37.8 | 32.0 | 0.427 | 0.0 |
HOH |
3.575 |
N |
O |
||
GLY | K:340 | N:340 | 35.0 | 0.467 | H | -63.9 | -34.9 | 35.0 | 0.467 | 0.0 |
HOH |
3.357 |
N |
O |
|||||||||
1ppj | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2004-07-20 | GLY | A:340 | A:340 | 34.0 | 0.453 | H | -64.9 | -32.1 | 34.0 | 0.453 | 0.0 |
HOH |
3.556 |
N |
O |
||
GLY | K:340 | N:340 | 34.0 | 0.453 | H | -65.0 | -31.1 | 34.0 | 0.453 | 0.0 |
HOH |
3.991 |
N |
O |
|||||||||
1sqq | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2005-10-25 | GLY | A:340 | A:340 | 20.0 | 0.267 | H | -67.8 | -35.2 | 20.0 | 0.267 | 0.0 |
HOH |
9.019 |
O |
O |
||
1sqv | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2005-09-06 | GLY | A:340 | A:340 | 21.0 | 0.28 | H | -61.8 | -26.5 | 21.0 | 0.28 | 0.0 |
HOH |
3.549 |
C |
O |
||
1sqx | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2005-09-06 | GLY | A:340 | A:340 | 19.0 | 0.253 | H | -58.9 | -41.1 | 19.0 | 0.253 | 0.0 |
HOH |
3.571 |
CA |
O |
||
2a06 | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2005-06-21 | GLY | A:340 | A:340 | 33.0 | 0.44 | H | -59.3 | -39.5 | 33.0 | 0.44 | 0.0 |
UNL UNL HOH |
8.208 6.330 3.246 |
N O CA |
O1 O1 O |
||
GLY | K:340 | N:340 | 33.0 | 0.44 | H | -54.5 | -41.8 | 33.0 | 0.44 | 0.0 |
HOH |
3.382 |
N |
O |
|||||||||
2fyu | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2006-08-29 | GLY | A:340 | A:340 | 20.0 | 0.267 | H | -56.3 | -39.7 | 20.0 | 0.267 | 0.0 | ||||||
2ybb | 9 | P31800 | 90.36 | 0.0 |
EM |
2011-10-19 | GLY | I:340 | A:340 | 34.0 | 0.453 | H | -64.4 | -37.8 | 34.0 | 0.453 | 0.0 |
HOH |
3.575 |
N |
O |
||
GLY | HA:340 | a:340 | 35.0 | 0.467 | H | -63.9 | -34.8 | 35.0 | 0.467 | 0.0 |
HOH |
3.357 |
N |
O |
|||||||||
5gpn | 1 | P31800 | 90.36 | 0.0 |
EM |
2017-04-05 | GLY | A:340 | A:340 | 39.0 | 0.52 | H | -57.7 | -40.4 | 39.0 | 0.52 | 0.0 | ||||||
GLY | M:340 | M:340 | 38.0 | 0.507 | H | -64.5 | -37.7 | 38.0 | 0.507 | 0.0 | |||||||||||||
5klv | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2016-10-12 | GLY | A:340 | A:340 | 17.0 | 0.227 | H | -60.2 | -32.5 | 17.0 | 0.227 | 0.0 |
6PE CDL |
7.778 5.203 |
HA2 HA2 |
H33 H1O1 |
||
5luf | 1 | P31800 | 90.36 | 0.0 |
EM |
2016-11-30 | GLY | A:340 | c:340 | 15.0 | 0.2 | H | -57.8 | -40.4 | 15.0 | 0.2 | 0.0 | ||||||
GLY | L:340 | l:340 | 14.0 | 0.187 | H | -64.5 | -37.8 | 14.0 | 0.187 | 0.0 | |||||||||||||
6nhg | 1 | P31800 | 90.36 | 0.0 |
X-RAY |
2019-06-19 | GLY | A:340 | A:340 | 19.0 | 0.253 | H | -62.3 | -27.1 | 19.0 | 0.253 | 0.0 |
6PE CDL |
7.567 5.387 |
HA2 HA2 |
H32 H1O1 |
||
6xvf | 1 | P31800 | 90.34 | 0.0 |
X-RAY |
2020-07-22 | GLY | A:339 | A:340 | 19.0 | 0.253 | H | -60.1 | -37.3 | 19.0 | 0.253 | 0.0 |
6PE CDL HOH |
9.414 8.322 7.455 |
CA CA N |
N1 O1 O |
||
5nmi | 1 | P31800 | 90.32 | 0.0 |
X-RAY |
2017-06-14 | GLY | A:339 | A:340 | 26.0 | 0.347 | H | -53.0 | -42.5 | 26.0 | 0.347 | 0.0 |
CDL |
8.334 |
CA |
OA4 |
||
GLY | L:339 | N:340 | 26.0 | 0.347 | H | -52.9 | -42.5 | 26.0 | 0.347 | 0.0 |
CDL |
8.945 |
N |
OA3 |
|||||||||
6zft | 1 | P31800 | 90.09 | 0.0 |
X-RAY |
2021-06-30 | GLY | A:338 | A:340 | 21.0 | 0.28 | H | -50.7 | -51.4 | 21.0 | 0.28 | 0.0 |
6PE PG4 CDL |
9.480 4.904 8.343 |
N N CA |
N1 O5 O1 |
||
6zfs | 1 | P31800 | 89.86 | 0.0 |
X-RAY |
2021-06-30 | GLY | A:339 | A:340 | 19.0 | 0.253 | H | -55.5 | -38.5 | 19.0 | 0.253 | 0.0 |
6PE CDL HOH |
9.397 8.421 7.606 |
N CA N |
N1 O1 O |
||
6zfu | 1 | P31800 | 89.86 | 0.0 |
X-RAY |
2021-06-30 | GLY | A:339 | A:340 | 21.0 | 0.28 | H | -57.0 | -37.0 | 21.0 | 0.28 | 0.0 |
6PE CDL HOH |
9.398 8.428 7.613 |
N CA N |
N1 O1 O |
||
7o37 | 1 | Q9CZ13 | 89.46 | 0.0 |
EM |
2021-10-13 | GLY | A:340 | A:340 | 14.0 | 0.187 | H | -61.6 | -41.3 | 14.0 | 0.187 | 0.0 |
3PE CDL |
8.759 7.948 |
N CA |
N CB2 |
||
GLY | K:340 | L:340 | 18.0 | 0.24 | H | -62.4 | -39.1 | 18.0 | 0.24 | 0.0 |
3PE CDL |
9.395 7.836 |
N CA |
N CB2 |
|||||||||
7o3c | 1 | Q9CZ13 | 89.46 | 0.0 |
EM |
2021-10-13 | GLY | A:340 | A:340 | 17.0 | 0.227 | H | -61.8 | -39.3 | 17.0 | 0.227 | 0.0 |
3PE CDL |
8.788 7.337 |
N CA |
N CA2 |
||
GLY | K:340 | L:340 | 17.0 | 0.227 | H | -62.5 | -38.4 | 17.0 | 0.227 | 0.0 |
3PE CDL |
8.960 8.042 |
N CA |
N CB2 |
|||||||||
7o3e | 1 | Q9CZ13 | 89.46 | 0.0 |
EM |
2021-10-13 | GLY | A:340 | A:340 | 21.0 | 0.28 | H | -62.2 | -39.2 | 21.0 | 0.28 | 0.0 | ||||||
GLY | H:340 | L:340 | 18.0 | 0.24 | H | -62.7 | -39.0 | 18.0 | 0.24 | 0.0 |
CDL |
7.654 |
CA |
CA2 |
|||||||||
7o3h | 1 | Q9CZ13 | 89.46 | 0.0 |
EM |
2021-10-13 | GLY | A:340 | A:340 | 16.0 | 0.213 | H | -61.5 | -40.7 | 16.0 | 0.213 | 0.0 |
3PE CDL |
8.997 7.249 |
N CA |
N C1 |
||
GLY | K:340 | L:340 | 20.0 | 0.267 | H | -61.7 | -40.8 | 20.0 | 0.267 | 0.0 |
3PE CDL |
9.030 8.155 |
N CA |
N CB2 |
|||||||||
6haw | 1 | P31800 | 89.19 | 0.0 |
X-RAY |
2019-01-16 | GLY | A:333 | A:340 | 21.0 | 0.28 | H | -63.0 | -35.4 | 21.0 | 0.28 | 0.0 |
6PE PO4 CDL HOH |
9.539 7.203 7.805 4.544 |
CA N CA O |
N1 O2 O1 O |
||
1bcc | 1 | P13272 | 87.22 | 0.0 |
X-RAY |
1998-08-19 | GLY | A:340 | A:340 | 21.0 | 0.28 | H | -75.8 | -30.7 | 21.0 | 0.28 | 0.0 | ||||||
2bcc | 1 | ? | 87.22 | 0.0 |
X-RAY |
1999-08-02 | GLY | A:340 | A:340 | 19.0 | 0.253 | H | -65.7 | -40.3 | 19.0 | 0.253 | 0.0 | ||||||
3bcc | 1 | P31800 | 87.22 | 0.0 |
X-RAY |
1998-08-19 | GLY | A:340 | A:340 | 22.0 | 0.293 | H | -56.7 | -47.5 | 22.0 | 0.293 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p31930-f1 | 1 | P31930 | 100.0 | 0.0 | GLY | A:374 | A:374 | 18.0 | 0.24 | H | -59.2 | -34.4 |