Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 122354690 | . | G | A | CCDS46893.1:NM_001113523.1:c.1780Gtg>Atg_NP_001106995.1:p.594V>M | Homo sapiens poly (ADP-ribose) polymerase family, member 15 (PARP15), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3blj | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2007-12-25 | VAL | A:137 | A:572 | 51.0 | 0.329 | S | -63.7 | -39.8 | 51.0 | 0.329 | 0.0 |
CL HOH |
7.905 2.651 |
N O |
CL O |
||
VAL | B:137 | B:572 | 32.0 | 0.206 | S | -68.3 | -46.5 | NA | NA | NA | |||||||||||||
3gey | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2009-03-24 | VAL | A:137 | A:572 | 47.0 | 0.303 | S | -69.0 | -46.5 | 47.0 | 0.303 | 0.0 |
P34 |
5.997 |
N |
CAH |
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VAL | B:137 | B:572 | 47.0 | 0.303 | S | -73.3 | -43.1 | NA | NA | NA | |||||||||||||
VAL | C:137 | C:572 | 48.0 | 0.31 | S | -67.9 | -42.0 | NA | NA | NA | |||||||||||||
VAL | D:137 | D:572 | 49.0 | 0.316 | S | -72.9 | -46.2 | NA | NA | NA | |||||||||||||
7osp | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | VAL | A:137 | A:594 | 43.0 | 0.277 | S | -69.3 | -40.3 | 43.0 | 0.277 | 0.0 |
0Q6 HOH |
6.662 2.682 |
N O |
CAF O |
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VAL | B:137 | B:594 | 44.0 | 0.284 | S | -68.9 | -44.0 | 44.0 | 0.284 | 0.0 |
DMS HOH |
6.993 2.752 |
N O |
C1 O |
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7oss | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | VAL | A:137 | A:594 | 45.0 | 0.29 | S | -69.0 | -41.5 | 45.0 | 0.29 | 0.0 |
0SI HOH |
7.044 2.741 |
N O |
C17 O |
||
VAL | B:137 | B:594 | 31.0 | 0.2 | S | -68.3 | -42.8 | 31.0 | 0.2 | 0.0 |
DMS HOH |
7.069 2.809 |
N O |
C1 O |
|||||||||
7osx | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | VAL | A:137 | A:594 | 44.0 | 0.284 | S | -73.8 | -39.6 | 44.0 | 0.284 | 0.0 |
0UI HOH |
6.687 2.687 |
N O |
C9 O |
||
VAL | B:137 | B:594 | 35.0 | 0.226 | S | -70.2 | -43.7 | 35.0 | 0.226 | 0.0 |
DMS HOH |
7.111 2.852 |
N O |
C2 O |
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7otf | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | VAL | A:137 | A:594 | 46.0 | 0.297 | S | -68.5 | -42.6 | 46.0 | 0.297 | 0.0 |
1H9 HOH |
6.906 2.738 |
N O |
CAK O |
||
VAL | B:137 | B:594 | 41.0 | 0.265 | S | -69.6 | -42.9 | 41.0 | 0.265 | 0.0 |
HOH |
2.678 |
O |
O |
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7oth | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | VAL | A:137 | A:594 | 44.0 | 0.284 | S | -68.1 | -40.1 | 44.0 | 0.284 | 0.0 |
VJN HOH |
6.951 2.629 |
N O |
C6 O |
||
VAL | B:137 | B:594 | 34.0 | 0.219 | S | -68.9 | -41.3 | 34.0 | 0.219 | 0.0 |
DMS HOH |
7.168 2.749 |
N O |
C1 O |
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7ouw | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | VAL | A:137 | A:594 | 45.0 | 0.29 | S | -71.4 | -39.1 | 45.0 | 0.29 | 0.0 |
1OI HOH |
6.767 2.660 |
N O |
C3 O |
||
VAL | B:137 | B:594 | 44.0 | 0.284 | S | -72.8 | -42.1 | 44.0 | 0.284 | 0.0 |
DMS HOH |
7.335 3.230 |
N N |
C1 O |
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7oux | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | VAL | A:137 | A:594 | 47.0 | 0.303 | S | -69.5 | -41.4 | 47.0 | 0.303 | 0.0 |
1O7 HOH |
6.999 2.685 |
N O |
C5 O |
||
VAL | B:137 | B:594 | 49.0 | 0.316 | S | -71.1 | -40.7 | 49.0 | 0.316 | 0.0 |
DMS HOH |
7.508 3.211 |
N O |
C2 O |
|||||||||
4f0e | 1 | Q460N3 | 99.0 | 2e-147 |
X-RAY |
2012-09-05 | VAL | A:116 | A:572 | 32.0 | 0.206 | S | -77.3 | -34.2 | 32.0 | 0.206 | 0.0 |
0RU HOH |
8.008 4.048 |
N O |
CAD O |
||
VAL | B:116 | B:572 | 43.0 | 0.277 | S | -65.7 | -60.0 | NA | NA | NA | |||||||||||||
VAL | C:116 | C:572 | 25.0 | 0.161 | S | -67.1 | -41.7 | NA | NA | NA | |||||||||||||
VAL | D:116 | D:572 | 35.0 | 0.226 | S | -65.8 | -37.8 | NA | NA | NA | |||||||||||||
7oqq | 1 | Q460N3 | 100.0 | 3e-147 |
X-RAY |
2021-12-08 | VAL | A:114 | A:594 | 44.0 | 0.284 | S | -64.2 | -42.6 | 44.0 | 0.284 | 0.0 |
G18 HOH |
6.587 2.617 |
N O |
CAD O |
||
VAL | B:114 | B:594 | 50.0 | 0.323 | S | -73.9 | -39.6 | 50.0 | 0.323 | 0.0 |
DMS HOH |
7.905 2.375 |
N O |
C2 O |
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6ek3 | 1 | Q460N3 | 94.37 | 2e-146 |
X-RAY |
2018-07-25 | VAL | A:137 | A:399 | 45.0 | 0.29 | S | -70.1 | -41.4 | 45.0 | 0.29 | 0.0 |
OUL HOH |
6.271 2.788 |
N O |
CAN O |
||
VAL | B:137 | B:399 | 38.0 | 0.245 | S | -67.8 | -46.2 | 38.0 | 0.245 | 0.0 |
OUL HOH |
6.019 2.740 |
N O |
CAR O |
|||||||||
6ry4 | 1 | Q460N3 | 100.0 | 2e-146 |
X-RAY |
2020-07-15 | VAL | A:113 | A:594 | 46.0 | 0.297 | S | -68.1 | -39.7 | 46.0 | 0.297 | 0.0 |
KMW HOH |
6.219 2.721 |
N O |
CAK O |
||
VAL | B:113 | B:594 | 41.0 | 0.265 | S | -71.3 | -41.0 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q460n3-f1 | 1 | Q460N3 | 100.0 | 0.0 | VAL | A:594 | A:594 | 40.0 | 0.258 | S | -78.8 | -32.9 |