Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 122354714 | . | G | A | CCDS46893.1:NM_001113523.1:c.1804Gac>Aac_NP_001106995.1:p.602D>N | Homo sapiens poly (ADP-ribose) polymerase family, member 15 (PARP15), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3blj | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2007-12-25 | ASP | A:145 | A:580 | 95.0 | 0.633 | T | -59.5 | -26.7 | 95.0 | 0.633 | 0.0 |
CL HOH |
9.125 3.076 |
N N |
CL O |
||
ASP | B:145 | B:580 | 92.0 | 0.613 | T | -45.8 | -33.3 | NA | NA | NA | |||||||||||||
3gey | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2009-03-24 | ASP | A:145 | A:580 | 93.0 | 0.62 | T | -53.6 | -31.0 | 93.0 | 0.62 | 0.0 |
P34 |
8.294 |
O |
O |
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ASP | B:145 | B:580 | 95.0 | 0.633 | T | -54.9 | -31.3 | NA | NA | NA | |||||||||||||
ASP | C:145 | C:580 | 89.0 | 0.593 | T | -55.7 | -28.7 | NA | NA | NA | |||||||||||||
ASP | D:145 | D:580 | 92.0 | 0.613 | T | -50.8 | -31.0 | NA | NA | NA | |||||||||||||
7osp | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | ASP | A:145 | A:602 | 94.0 | 0.627 | T | -59.6 | -29.3 | 94.0 | 0.627 | 0.0 |
0Q6 HOH |
9.031 2.902 |
O N |
NAA O |
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ASP | B:145 | B:602 | 91.0 | 0.607 | T | -58.5 | -24.8 | 91.0 | 0.607 | 0.0 |
DMS HOH |
9.196 2.700 |
N OD1 |
O O |
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7oss | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | ASP | A:145 | A:602 | 98.0 | 0.653 | T | -59.4 | -27.2 | 98.0 | 0.653 | 0.0 |
0SI HOH |
8.454 3.433 |
O N |
S1 O |
||
ASP | B:145 | B:602 | 93.0 | 0.62 | T | -59.5 | -26.7 | 93.0 | 0.62 | 0.0 |
DMS HOH |
9.193 2.739 |
C OD1 |
S O |
|||||||||
7osx | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | ASP | A:145 | A:602 | 97.0 | 0.647 | T | -57.7 | -26.5 | 97.0 | 0.647 | 0.0 |
0UI HOH |
8.572 2.643 |
O OD1 |
S1 O |
||
ASP | B:145 | B:602 | 92.0 | 0.613 | T | -58.1 | -27.9 | 92.0 | 0.613 | 0.0 |
DMS HOH |
9.200 2.672 |
C OD1 |
S O |
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7otf | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | ASP | A:145 | A:602 | 97.0 | 0.647 | T | -60.1 | -28.8 | 97.0 | 0.647 | 0.0 |
1H9 HOH |
8.352 2.804 |
O OD1 |
SAT O |
||
ASP | B:145 | B:602 | 91.0 | 0.607 | T | -58.2 | -25.2 | 91.0 | 0.607 | 0.0 |
HOH |
2.736 |
O |
O |
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7oth | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | ASP | A:145 | A:602 | 95.0 | 0.633 | T | -61.9 | -25.6 | 95.0 | 0.633 | 0.0 |
VJN HOH |
8.622 2.696 |
O N |
S1 O |
||
ASP | B:145 | B:602 | 93.0 | 0.62 | T | -59.9 | -28.1 | 93.0 | 0.62 | 0.0 |
DMS HOH |
9.121 2.772 |
C OD1 |
S O |
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7ouw | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | ASP | A:145 | A:602 | 100.0 | 0.667 | T | -58.5 | -28.3 | 100.0 | 0.667 | 0.0 |
1OI HOH |
8.583 6.850 |
O O |
S1 O |
||
ASP | B:145 | B:602 | 90.0 | 0.6 | T | -62.1 | -25.5 | 90.0 | 0.6 | 0.0 |
DMS HOH |
9.129 6.529 |
C N |
S O |
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7oux | 1 | Q460N3 | 94.84 | 1e-147 |
X-RAY |
2021-12-08 | ASP | A:145 | A:602 | 96.0 | 0.64 | T | -60.9 | -30.1 | 96.0 | 0.64 | 0.0 |
1O7 HOH |
8.425 2.797 |
O N |
S1 O |
||
ASP | B:145 | B:602 | 94.0 | 0.627 | T | -54.9 | -30.4 | 94.0 | 0.627 | 0.0 |
DMS HOH |
8.947 2.696 |
N OD1 |
O O |
|||||||||
4f0e | 1 | Q460N3 | 99.0 | 2e-147 |
X-RAY |
2012-09-05 | ASP | A:124 | A:580 | 90.0 | 0.6 | T | -60.9 | -13.4 | 90.0 | 0.6 | 0.0 |
0RU HOH |
5.091 3.587 |
O N |
CAE O |
||
ASP | B:124 | B:580 | 98.0 | 0.653 | T | -56.0 | -25.8 | NA | NA | NA | |||||||||||||
ASP | C:124 | C:580 | 100.0 | 0.667 | T | -61.4 | -35.0 | NA | NA | NA | |||||||||||||
ASP | D:124 | D:580 | 93.0 | 0.62 | T | -50.0 | -16.7 | NA | NA | NA | |||||||||||||
7oqq | 1 | Q460N3 | 100.0 | 3e-147 |
X-RAY |
2021-12-08 | ASP | A:122 | A:602 | 94.0 | 0.627 | T | -63.4 | -28.0 | 94.0 | 0.627 | 0.0 |
G18 HOH |
8.775 6.781 |
O O |
SAK O |
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ASP | B:122 | B:602 | 88.0 | 0.587 | T | -56.0 | -26.2 | 88.0 | 0.587 | 0.0 |
DMS HOH |
9.005 2.864 |
N OD1 |
O O |
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6ek3 | 1 | Q460N3 | 94.37 | 2e-146 |
X-RAY |
2018-07-25 | ASP | A:145 | A:407 | 96.0 | 0.64 | T | -57.0 | -25.0 | 96.0 | 0.64 | 0.0 |
OUL HOH |
8.933 2.894 |
O OD1 |
NAP O |
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ASP | B:145 | B:407 | 91.0 | 0.607 | T | -58.8 | -24.4 | 91.0 | 0.607 | 0.0 |
OUL HOH |
8.923 2.758 |
O OD1 |
NAA O |
|||||||||
6ry4 | 1 | Q460N3 | 100.0 | 2e-146 |
X-RAY |
2020-07-15 | ASP | A:121 | A:602 | 94.0 | 0.627 | T | -64.6 | -26.5 | 94.0 | 0.627 | 0.0 |
KMW HOH |
9.097 2.783 |
C N |
NAP O |
||
ASP | B:121 | B:602 | 94.0 | 0.627 | T | -61.2 | -27.2 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q460n3-f1 | 1 | Q460N3 | 100.0 | 0.0 | ASP | A:602 | A:602 | 97.0 | 0.647 | T | -59.5 | -20.9 |