Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 195779018 | . | T | A | CCDS3312.1:NM_001128148.1:c.2078aAa>aTa_NP_001121620.1:p.693K>I | Homo sapiens transferrin receptor (TFRC), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3s9l | 1 | P02786 | 99.69 | 0.0 |
X-RAY |
2011-08-10 | LYS | A:587 | A:693 | 96.0 | 0.48 | T | -62.7 | -57.8 | 36.0 | 0.18 | 0.3 |
A:P02786:0.3 |
CA |
8.644 |
CG |
CA |
|
LYS | B:587 | B:693 | 57.0 | NA | T | -71.1 | -48.1 | NA | NA | NA | |||||||||||||
3s9m | 1 | P02786 | 99.69 | 0.0 |
X-RAY |
2011-08-10 | LYS | A:587 | A:693 | 97.0 | 0.485 | T | -95.9 | -43.3 | 34.0 | 0.17 | 0.315 |
A:P02786:0.315 |
CA |
8.656 |
CG |
CA |
|
LYS | B:587 | B:693 | 56.0 | NA | T | -109.4 | -41.7 | NA | NA | NA | |||||||||||||
3s9n | 1 | P02786 | 99.69 | 0.0 |
X-RAY |
2011-08-10 | LYS | A:587 | A:693 | 120.0 | 0.6 | T | -84.7 | -47.9 | 53.0 | 0.265 | 0.335 |
A:P02786:0.335 |
CA |
8.921 |
CG |
CA |
|
LYS | B:587 | B:693 | 75.0 | NA | T | -85.1 | -47.1 | NA | NA | NA | |||||||||||||
1de4 | 3 | P02786 | 99.84 | 0.0 |
X-RAY |
2000-01-19 | LYS | C:573 | C:693 | 102.0 | 0.51 | T | -77.3 | -46.3 | 40.0 | 0.2 | 0.31 |
F:P02786:0.31 |
CA HOH |
8.842 7.104 |
CG O |
CA O |
|
LYS | F:573 | F:693 | 101.0 | 0.505 | T | -77.3 | -46.6 | 39.0 | 0.195 | 0.31 |
C:P02786:0.31 |
CA HOH |
8.957 7.185 |
CG O |
CA O |
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LYS | I:573 | I:693 | 103.0 | 0.515 | T | -78.5 | -44.7 | NA | NA | NA | |||||||||||||
3kas | 1 | P02786 | 99.84 | 0.0 |
X-RAY |
2010-03-09 | LYS | A:573 | A:693 | 138.0 | 0.69 | T | -75.3 | -45.4 | 66.0 | 0.33 | 0.36 |
A:P02786:0.36 |
HOH |
3.710 |
CD |
O |
|
6gsr | 2 | P02786 | 99.84 | 0.0 |
EM |
2019-03-27 | LYS | B:573 | Ab:693 | 141.0 | 0.705 | T | -75.3 | -45.4 | 85.0 | 0.425 | 0.28 |
Q:P02786:0.28 |
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LYS | Q:573 | Aq:693 | 138.0 | 0.69 | T | -75.3 | -45.5 | 72.0 | 0.36 | 0.33 |
B:P02786:0.33 |
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6h5i | 2 | P02786 | 99.84 | 0.0 |
EM |
2019-03-27 | LYS | B:573 | Ab:693 | 130.0 | 0.65 | T | -71.8 | -30.8 | 117.0 | 0.585 | 0.065 |
Q:P02786:0.065 |
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LYS | Q:573 | Aq:693 | 140.0 | 0.7 | T | -84.4 | -34.4 | 59.0 | 0.295 | 0.405 |
B:P02786:0.405 |
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6wrw | 1 | P02786 | 99.84 | 0.0 |
X-RAY |
2021-04-28 | LYS | A:573 | A:693 | 104.0 | 0.52 | T | -82.9 | -44.3 | 39.0 | 0.195 | 0.325 |
B:P02786:0.325 |
NAG NAG CA |
8.128 5.924 7.147 |
NZ NZ O |
C6 C8 CA |
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LYS | B:573 | B:693 | 87.0 | 0.435 | T | -82.1 | -44.7 | 31.0 | 0.155 | 0.28 |
A:P02786:0.28 |
NAG NAG CA |
9.292 7.800 7.841 |
CE CE O |
C6 O7 CA |
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6wrx | 1 | P02786 | 99.84 | 0.0 |
X-RAY |
2021-04-28 | LYS | A:573 | A:693 | 89.0 | 0.445 | T | -80.6 | -48.3 | 32.0 | 0.16 | 0.285 |
B:P02786:0.285 |
NAG NAG CA |
9.018 6.484 8.353 |
CE CE NZ |
O6 C8 CA |
|
LYS | B:573 | B:693 | 94.0 | 0.47 | T | -81.8 | -45.9 | 39.0 | 0.195 | 0.275 |
A:P02786:0.275 |
NAG NAG CA |
7.960 6.181 8.345 |
CE CE NZ |
O6 C8 CA |
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6okd | 1 | P02786 | 99.84 | 0.0 |
X-RAY |
2020-04-15 | LYS | A:575 | A:575 | 170.0 | 0.85 | T | -79.6 | -33.4 | 170.0 | 0.85 | 0.0 |
HOH |
3.242 |
O |
O |
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LYS | B:575 | B:575 | 172.0 | 0.86 | T | -78.3 | -34.0 | NA | NA | NA | |||||||||||||
6d03 | 1 | P02786 | 99.84 | 0.0 |
EM |
2018-06-20 | LYS | A:592 | A:693 | 101.0 | 0.505 | T | -77.5 | -32.6 | 36.0 | 0.18 | 0.325 |
B:P02786:0.325 |
NAG NAG CA |
9.270 8.541 8.364 |
NZ CE CG |
C6 O6 CA |
|
LYS | B:592 | B:693 | 105.0 | 0.525 | T | -91.6 | -37.9 | 47.0 | 0.235 | 0.29 |
A:P02786:0.29 |
NAG NAG CA |
9.271 8.163 8.908 |
NZ NZ CE |
O6 O6 CA |
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6d04 | 1 | P02786 | 99.84 | 0.0 |
EM |
2018-06-20 | LYS | A:592 | A:693 | 121.0 | 0.605 | T | -88.4 | -40.5 | 47.0 | 0.235 | 0.37 |
B:P02786:0.37 |
NAG NAG CA |
7.647 7.269 9.145 |
NZ NZ CG |
O6 O6 CA |
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LYS | B:592 | B:693 | 120.0 | 0.6 | T | -88.4 | -40.6 | 50.0 | 0.25 | 0.35 |
A:P02786:0.35 |
NAG NAG CA |
7.991 7.243 9.149 |
NZ NZ CG |
O6 C6 CA |
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6d05 | 1 | P02786 | 99.84 | 0.0 |
EM |
2018-06-20 | LYS | A:592 | A:693 | 112.0 | 0.56 | T | -92.4 | -35.7 | 56.0 | 0.28 | 0.28 |
B:P02786:0.28 |
NAG NAG CA |
8.235 7.941 9.120 |
NZ NZ CE |
O6 C6 CA |
|
LYS | B:592 | B:693 | 113.0 | 0.565 | T | -92.4 | -35.7 | 65.0 | 0.325 | 0.24 |
A:P02786:0.24 |
NAG NAG CA |
8.505 6.902 9.152 |
NZ NZ CG |
C6 C6 CA |
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6wrv | 1 | P02786 | 99.84 | 0.0 |
X-RAY |
2021-04-28 | LYS | A:573 | A:693 | 86.0 | 0.43 | T | -80.2 | -43.5 | 26.0 | 0.13 | 0.3 |
B:P02786:0.3 |
NAG NAG CA |
8.662 5.745 8.275 |
CE CE NZ |
C6 C8 CA |
|
LYS | B:573 | B:693 | 94.0 | 0.47 | T | -80.3 | -44.4 | 41.0 | 0.205 | 0.265 |
A:P02786:0.265 |
NAG NAG BMA CA |
8.569 6.468 8.966 6.754 |
CE CE C O |
C6 C8 O6 CA |
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LYS | C:573 | E:693 | 89.0 | 0.445 | T | -80.7 | -44.0 | 89.0 | 0.445 | 0.0 |
CA |
7.195 |
O |
CA |
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1cx8 | 1 | P02786 | 99.53 | 0.0 |
X-RAY |
1999-09-09 | LYS | A:572 | A:693 | 118.0 | 0.59 | T | -63.8 | -30.7 | 71.0 | 0.355 | 0.235 |
B:P02786:0.235 |
SM NAG |
8.995 7.200 |
O NZ |
SM O6 |
|
LYS | B:572 | B:693 | 117.0 | 0.585 | T | -62.6 | -32.1 | 69.0 | 0.345 | 0.24 |
A:P02786:0.24 |
NAG SM |
7.078 9.009 |
NZ O |
O6 SM |
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LYS | C:572 | C:693 | 119.0 | 0.595 | T | -66.3 | -31.4 | NA | NA | NA | |||||||||||||
LYS | D:572 | D:693 | 121.0 | 0.605 | T | -64.0 | -30.9 | NA | NA | NA | |||||||||||||
LYS | E:572 | E:693 | 121.0 | 0.605 | T | -65.2 | -30.0 | NA | NA | NA | |||||||||||||
LYS | F:572 | F:693 | 120.0 | 0.6 | T | -66.8 | -32.0 | NA | NA | NA | |||||||||||||
LYS | G:572 | G:693 | 118.0 | 0.59 | T | -63.9 | -32.9 | NA | NA | NA | |||||||||||||
LYS | H:572 | H:693 | 118.0 | 0.59 | T | -64.8 | -31.3 | NA | NA | NA | |||||||||||||
1suv | 1 | P02786 | 99.53 | 0.0 |
EM |
2004-04-13 | LYS | A:572 | A:693 | 116.0 | 0.58 | T | -63.8 | -30.8 | 69.0 | 0.345 | 0.235 |
B:P02786:0.235 |
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LYS | B:572 | B:693 | 120.0 | 0.6 | T | -62.6 | -32.1 | 71.0 | 0.355 | 0.245 |
A:P02786:0.245 |
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2nsu | 1 | P02786 | 99.53 | 0.0 |
EM |
2007-03-27 | LYS | A:572 | A:693 | 118.0 | 0.59 | T | -63.9 | -30.6 | 70.0 | 0.35 | 0.24 |
B:P02786:0.24 |
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LYS | B:572 | B:693 | 119.0 | 0.595 | T | -62.6 | -32.2 | 70.0 | 0.35 | 0.245 |
A:P02786:0.245 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p02786-f1 | 1 | P02786 | 100.0 | 0.0 | LYS | A:693 | A:693 | 116.0 | 0.58 | T | -74.2 | -36.8 |