Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 195787103 | . | T | A | CCDS3312.1:NM_001128148.1:c.1484aAg>aTg_NP_001121620.1:p.495K>M | Homo sapiens transferrin receptor (TFRC), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3s9l | 1 | P02786 | 99.69 | 0.0 |
X-RAY |
2011-08-10 | LYS | A:389 | A:495 | 97.0 | 0.485 | E | -113.8 | 142.9 | 97.0 | 0.485 | 0.0 | ||||||
LYS | B:389 | B:495 | 41.0 | NA | E | -89.3 | 141.3 | NA | NA | NA | |||||||||||||
3s9m | 1 | P02786 | 99.69 | 0.0 |
X-RAY |
2011-08-10 | LYS | A:389 | A:495 | 99.0 | 0.495 | E | -124.0 | 139.3 | 99.0 | 0.495 | 0.0 | ||||||
LYS | B:389 | B:495 | 40.0 | NA | E | -91.4 | 144.7 | NA | NA | NA | |||||||||||||
3s9n | 1 | P02786 | 99.69 | 0.0 |
X-RAY |
2011-08-10 | LYS | A:389 | A:495 | 103.0 | 0.515 | E | -118.9 | 131.3 | 103.0 | 0.515 | 0.0 | ||||||
LYS | B:389 | B:495 | 62.0 | NA | E | -101.1 | 138.9 | NA | NA | NA | |||||||||||||
1de4 | 3 | P02786 | 99.84 | 0.0 |
X-RAY |
2000-01-19 | LYS | C:375 | C:495 | 54.0 | 0.27 | E | -101.1 | 162.3 | 54.0 | 0.27 | 0.0 |
HOH |
4.741 |
CB |
O |
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LYS | F:375 | F:495 | 54.0 | 0.27 | E | -102.4 | 161.6 | 54.0 | 0.27 | 0.0 |
HOH |
4.916 |
O |
O |
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LYS | I:375 | I:495 | 54.0 | 0.27 | E | -103.6 | 161.6 | NA | NA | NA | |||||||||||||
3kas | 1 | P02786 | 99.84 | 0.0 |
X-RAY |
2010-03-09 | LYS | A:375 | A:495 | 111.0 | 0.555 | E | -109.1 | 150.6 | 111.0 | 0.555 | 0.0 |
PO4 HOH |
3.523 3.894 |
CB CA |
O3 O |
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6gsr | 2 | P02786 | 99.84 | 0.0 |
EM |
2019-03-27 | LYS | B:375 | Ab:495 | 111.0 | 0.555 | E | -109.0 | 150.6 | 111.0 | 0.555 | 0.0 | ||||||
LYS | Q:375 | Aq:495 | 112.0 | 0.56 | E | -109.1 | 150.6 | 112.0 | 0.56 | 0.0 | |||||||||||||
6h5i | 2 | P02786 | 99.84 | 0.0 |
EM |
2019-03-27 | LYS | B:375 | Ab:495 | 109.0 | 0.545 | E | -108.3 | 140.5 | 109.0 | 0.545 | 0.0 | ||||||
LYS | Q:375 | Aq:495 | 103.0 | 0.515 | E | -112.6 | 134.6 | 103.0 | 0.515 | 0.0 | |||||||||||||
6wrw | 1 | P02786 | 99.84 | 0.0 |
X-RAY |
2021-04-28 | LYS | A:375 | A:495 | 107.0 | 0.535 | E | -104.6 | 153.0 | 107.0 | 0.535 | 0.0 | ||||||
LYS | B:375 | B:495 | 86.0 | 0.43 | E | -103.9 | 149.5 | 86.0 | 0.43 | 0.0 | |||||||||||||
6wrx | 1 | P02786 | 99.84 | 0.0 |
X-RAY |
2021-04-28 | LYS | A:375 | A:495 | 120.0 | 0.6 | E | -104.1 | 149.9 | 120.0 | 0.6 | 0.0 | ||||||
LYS | B:375 | B:495 | 116.0 | 0.58 | E | -101.9 | 149.8 | 116.0 | 0.58 | 0.0 | |||||||||||||
6okd | 1 | P02786 | 99.84 | 0.0 |
X-RAY |
2020-04-15 | LYS | A:377 | A:377 | 42.0 | NA | E | -116.9 | 146.9 | 42.0 | NA | NA |
GOL HOH |
3.732 3.420 |
CB CA |
O1 O |
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LYS | B:377 | B:377 | 109.0 | 0.545 | E | -119.6 | 148.2 | NA | NA | NA | |||||||||||||
6d03 | 1 | P02786 | 99.84 | 0.0 |
EM |
2018-06-20 | LYS | A:394 | A:495 | 106.0 | 0.53 | E | -123.1 | 117.5 | 106.0 | 0.53 | 0.0 | ||||||
LYS | B:394 | B:495 | 91.0 | 0.455 | E | -120.4 | 137.9 | 91.0 | 0.455 | 0.0 | |||||||||||||
6d04 | 1 | P02786 | 99.84 | 0.0 |
EM |
2018-06-20 | LYS | A:394 | A:495 | 108.0 | 0.54 | E | -117.6 | 120.8 | 108.0 | 0.54 | 0.0 | ||||||
LYS | B:394 | B:495 | 107.0 | 0.535 | E | -117.6 | 120.9 | 107.0 | 0.535 | 0.0 | |||||||||||||
6d05 | 1 | P02786 | 99.84 | 0.0 |
EM |
2018-06-20 | LYS | A:394 | A:495 | 83.0 | 0.415 | E | -126.4 | 126.3 | 83.0 | 0.415 | 0.0 | ||||||
LYS | B:394 | B:495 | 84.0 | 0.42 | E | -126.4 | 126.3 | 84.0 | 0.42 | 0.0 | |||||||||||||
6wrv | 1 | P02786 | 99.84 | 0.0 |
X-RAY |
2021-04-28 | LYS | A:375 | A:495 | 107.0 | 0.535 | E | -112.4 | 146.4 | 107.0 | 0.535 | 0.0 | ||||||
LYS | B:375 | B:495 | 122.0 | 0.61 | E | -113.2 | 147.5 | 122.0 | 0.61 | 0.0 | |||||||||||||
LYS | C:375 | E:495 | 82.0 | 0.41 | E | -112.5 | 146.8 | 82.0 | 0.41 | 0.0 | |||||||||||||
1cx8 | 1 | P02786 | 99.53 | 0.0 |
X-RAY |
1999-09-09 | LYS | A:374 | A:495 | 68.0 | 0.34 | E | -59.0 | 151.6 | 68.0 | 0.34 | 0.0 | ||||||
LYS | B:374 | B:495 | 66.0 | 0.33 | E | -61.8 | 150.3 | 66.0 | 0.33 | 0.0 | |||||||||||||
LYS | C:374 | C:495 | 69.0 | 0.345 | E | -60.2 | 150.3 | NA | NA | NA | |||||||||||||
LYS | D:374 | D:495 | 69.0 | 0.345 | E | -61.6 | 149.8 | NA | NA | NA | |||||||||||||
LYS | E:374 | E:495 | 67.0 | 0.335 | E | -61.1 | 149.3 | NA | NA | NA | |||||||||||||
LYS | F:374 | F:495 | 65.0 | 0.325 | E | -61.6 | 149.8 | NA | NA | NA | |||||||||||||
LYS | G:374 | G:495 | 68.0 | 0.34 | E | -60.0 | 151.3 | NA | NA | NA | |||||||||||||
LYS | H:374 | H:495 | 65.0 | 0.325 | E | -58.7 | 152.0 | NA | NA | NA | |||||||||||||
1suv | 1 | P02786 | 99.53 | 0.0 |
EM |
2004-04-13 | LYS | A:374 | A:495 | 66.0 | 0.33 | E | -59.0 | 151.6 | 66.0 | 0.33 | 0.0 | ||||||
LYS | B:374 | B:495 | 68.0 | 0.34 | E | -61.8 | 150.3 | 68.0 | 0.34 | 0.0 | |||||||||||||
2nsu | 1 | P02786 | 99.53 | 0.0 |
EM |
2007-03-27 | LYS | A:374 | A:495 | 65.0 | 0.325 | E | -59.0 | 151.7 | 65.0 | 0.325 | 0.0 | ||||||
LYS | B:374 | B:495 | 65.0 | 0.325 | E | -61.8 | 150.2 | 65.0 | 0.325 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p02786-f1 | 1 | P02786 | 100.0 | 0.0 | LYS | A:495 | A:495 | 56.0 | 0.28 | E | -104.9 | 146.8 |