Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 3216860 | . | G | A | CCDS2562.1:NM_016302.3:c.161cCg>cTg_NP_057386.2:p.54P>L | Homo sapiens cereblon (CRBN), transcript variant 1, mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6bn7 | 2 | Q96SW2 | 97.06 | 0.0 |
X-RAY |
2018-05-30 | PRO | B:75 | B:54 | 0.0 | 0.0 | H | -62.2 | -35.9 | 0.0 | 0.0 | 0.0 |
RN3 |
9.124 |
CB |
O4 |
||
| 6bn8 | 2 | Q96SW2 | 97.06 | 0.0 |
X-RAY |
2018-06-06 | PRO | B:75 | B:54 | 0.0 | 0.0 | H | -47.6 | -48.0 | 0.0 | 0.0 | 0.0 | ||||||
| 6bn9 | 2 | Q96SW2 | 97.06 | 0.0 |
X-RAY |
2018-05-30 | PRO | B:75 | B:54 | 0.0 | 0.0 | H | -60.3 | -34.3 | 0.0 | 0.0 | 0.0 | ||||||
| 6bnb | 2 | Q96SW2 | 97.06 | 0.0 |
X-RAY |
2018-05-30 | PRO | B:75 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 6boy | 2 | Q96SW2 | 97.06 | 0.0 |
X-RAY |
2018-05-30 | PRO | B:75 | B:54 | 0.0 | 0.0 | H | -61.1 | -43.1 | 0.0 | 0.0 | 0.0 | ||||||
| 5hxb | 3 | Q96SW2 | 99.75 | 0.0 |
X-RAY |
2016-06-29 | PRO | C:18 | Z:54 | 0.0 | 0.0 | G | -70.1 | -31.7 | 0.0 | 0.0 | 0.0 |
85C |
9.407 |
CB |
O3 |
||
| PRO | E:18 | C:54 | 0.0 | 0.0 | G | -69.5 | -32.0 | NA | NA | NA | |||||||||||||
| 5v3o | 2 | Q96SW2 | 99.75 | 0.0 |
X-RAY |
2017-05-03 | PRO | B:18 | C:54 | 0.0 | 0.0 | G | -62.9 | -43.5 | 0.0 | 0.0 | 0.0 |
8W7 |
9.646 |
CB |
O3 |
||
| 6uml | 2 | Q96SW2 | 99.75 | 0.0 |
X-RAY |
2020-04-15 | PRO | B:18 | C:54 | 0.0 | 0.0 | G | -66.7 | -33.8 | 0.0 | 0.0 | 0.0 |
Y70 |
9.266 |
CB |
O20 |
||
| 6xk9 | 3 | Q96SW2 | 99.75 | 0.0 |
X-RAY |
2020-12-02 | PRO | C:18 | Z:54 | 1.0 | 0.007 | H | -58.2 | -33.3 | 1.0 | 0.007 | 0.0 |
V4M |
9.454 |
CB |
O3 |
||
| PRO | F:18 | C:54 | 1.0 | 0.007 | H | -58.5 | -33.7 | NA | NA | NA | |||||||||||||
| 5fqd | 2 | Q96SW2 | 99.02 | 0.0 |
X-RAY |
2016-02-24 | PRO | B:38 | B:54 | 1.0 | 0.007 | H | -58.5 | -33.7 | 1.0 | 0.007 | 0.0 |
LVY HOH |
9.359 2.786 |
CB O |
O19 O |
||
| PRO | E:38 | E:54 | 1.0 | 0.007 | T | -66.9 | -35.3 | NA | NA | NA | |||||||||||||
| 6h0f | 2 | Q96SW2 | 99.02 | 0.0 |
X-RAY |
2018-11-07 | PRO | B:38 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| PRO | E:38 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| PRO | H:38 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| PRO | K:38 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 6h0g | 2 | Q96SW2 | 99.02 | 0.0 |
X-RAY |
2018-11-07 | PRO | B:38 | B:54 | 1.0 | 0.007 | H | -64.7 | -40.4 | 1.0 | 0.007 | 0.0 |
Y70 |
8.001 |
HB3 |
O20 |
||
| PRO | E:38 | E:54 | 1.0 | 0.007 | H | -68.0 | -37.7 | NA | NA | NA | |||||||||||||
| 7lps | 2 | Q96SW2 | 100.0 | 0.0 |
X-RAY |
2021-06-02 | PRO | B:8 | B:54 | 0.0 | 0.0 | H | -70.1 | -35.4 | 0.0 | 0.0 | 0.0 |
RN9 |
9.734 |
CB |
O1 |
||
| PRO | E:8 | E:54 | 1.0 | 0.007 | H | -70.3 | -35.3 | NA | NA | NA | |||||||||||||
| PRO | H:8 | H:54 | 0.0 | 0.0 | H | -70.5 | -34.9 | NA | NA | NA | |||||||||||||
| PRO | K:8 | K:54 | 1.0 | 0.007 | H | -70.4 | -35.0 | NA | NA | NA | |||||||||||||
| 4tz4 | 2 | Q96SW2 | 100.0 | 0.0 |
X-RAY |
2014-08-06 | PRO | B:7 | C:54 | 1.0 | 0.007 | G | -67.8 | -33.0 | 1.0 | 0.007 | 0.0 |
LVY |
9.638 |
CB |
O19 |
||
| 4ci1 | 2 | P0CF65 | 84.08 | 0.0 |
X-RAY |
2014-07-16 | PRO | B:79 | B:55 | 1.0 | 0.007 | H | -59.1 | -42.3 | 1.0 | 0.007 | 0.0 |
EF2 |
9.536 |
CB |
O05 |
||
| 4ci2 | 2 | P0CF65 | 84.08 | 0.0 |
X-RAY |
2014-07-16 | PRO | B:79 | B:55 | 0.0 | 0.0 | H | -63.9 | -46.3 | 0.0 | 0.0 | 0.0 |
LVY HOH |
9.418 6.019 |
CB CG |
O19 O |
||
| 4ci3 | 2 | P0CF65 | 84.08 | 0.0 |
X-RAY |
2014-07-16 | PRO | B:79 | B:55 | 0.0 | 0.0 | H | -58.4 | -43.6 | 0.0 | 0.0 | 0.0 |
Y70 |
9.383 |
CB |
O20 |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q96sw2-f1 | 1 | Q96SW2 | 100.0 | 0.0 | PRO | A:54 | A:54 | 0.0 | 0.0 | H | -65.5 | -34.0 | |