Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 38012928 . G A CCDS33734.1:NM_001008392.1:c.457Gag>Aag_NP_001008393.1:p.153E>K Homo sapiens CTD small phosphatase like (CTDSPL), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hhl 1 O15194 100.0 5e-134 X-RAY
 2006-08-29 GLU A:75 A:75 101.0 0.532 H -61.3 -44.0 101.0 0.532 0.0 HOH
 2.750
 O
 O
GLU B:75 B:75 105.0 0.553 H -68.2 -36.2 NA NA NA
GLU C:75 C:75 103.0 0.542 H -60.3 -45.7 NA NA NA
GLU D:75 D:75 103.0 0.542 H -60.9 -45.6 NA NA NA
1ta0 1 Q9GZU7 81.67 4e-109 X-RAY
 2004-08-31 GLU A:62 A:137 83.0 0.437 H -62.1 -40.8 83.0 0.437 0.0 HOH
 2.834
 N
 O
3pgl 1 Q9GZU7 81.67 4e-109 X-RAY
 2011-03-09 GLU A:61 A:137 91.0 0.479 H -55.8 -44.1 91.0 0.479 0.0 HOH
 3.182
 O
 O
GLU B:61 B:137 102.0 0.537 H -54.2 -41.7 NA NA NA
1t9z 1 Q9GZU7 81.11 7e-109 X-RAY
 2004-08-31 GLU A:62 A:137 79.0 0.416 H -58.3 -34.8 79.0 0.416 0.0 HOH
 2.791
 N
 O
2ghq 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 GLU A:62 A:137 97.0 0.511 H -62.7 -40.9 97.0 0.511 0.0 HOH
 2.923
 N
 O
GLU B:62 B:137 91.0 0.479 H -62.5 -40.8 NA NA NA
2ght 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 GLU A:62 A:137 106.0 0.558 H -65.7 -34.3 106.0 0.558 0.0 HOH
 2.606
 OE1
 O
GLU B:62 B:137 97.0 0.511 H -63.2 -39.9 NA NA NA
6du2 1 A0A1S2ZIN9 81.11 1e-108 X-RAY
 2018-09-26 GLU A:61 A:137 81.0 0.426 H -55.0 -41.5 81.0 0.426 0.0 HOH
 6.598
 OE1
 O
GLU B:61 B:137 93.0 0.489 H -59.4 -36.0 NA NA NA
6du3 1 Q9GZU7 81.11 1e-108 X-RAY
 2018-09-26 GLU A:61 A:137 84.0 0.442 H -56.4 -37.1 84.0 0.442 0.0 HOH
 6.869
 N
 O
GLU B:61 B:137 85.0 0.447 H -51.8 -41.6 NA NA NA
4ygy 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 GLU A:65 A:137 88.0 0.463 H -66.4 -37.6 88.0 0.463 0.0 HOH
 3.851
 N
 O
GLU B:65 B:137 84.0 0.442 H -57.4 -44.7 NA NA NA
4yh1 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 GLU A:65 A:137 86.0 0.453 H -53.7 -43.3 86.0 0.453 0.0 HOH
 3.073
 O
 O
GLU B:65 B:137 82.0 0.432 H -41.8 -51.0 NA NA NA
3l0y 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 GLU A:65 A:137 90.0 0.474 H -61.2 -46.7 90.0 0.474 0.0 HOH
 2.566
 OE1
 O
GLU B:65 B:137 104.0 0.547 H -56.6 -42.3 NA NA NA
3l0b 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 GLU A:65 A:137 97.0 0.511 H -57.6 -46.8 97.0 0.511 0.0 HOH
 2.946
 O
 O
GLU B:65 B:137 101.0 0.532 H -59.9 -40.0 NA NA NA
3l0c 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 GLU A:65 A:137 74.0 0.389 H -67.6 -31.3 74.0 0.389 0.0 HOH
 2.911
 O
 O
GLU B:65 B:137 85.0 0.447 H -56.6 -47.3 NA NA NA
2q5e 1 O14595 82.12 3e-104 X-RAY
 2007-06-19 GLU A:64 A:148 82.0 0.432 H -73.5 -31.4 82.0 0.432 0.0 HOH
 7.157
 N
 O
GLU B:64 B:148 86.0 0.453 H -77.4 -29.2 NA NA NA
GLU C:64 C:148 92.0 0.484 H -70.3 -37.3 NA NA NA
GLU D:64 D:148 75.0 0.395 H -72.6 -41.6 NA NA NA
GLU E:64 E:148 77.0 0.405 H -70.3 -38.2 NA NA NA
GLU F:64 F:148 83.0 0.437 H -87.9 -21.0 NA NA NA
GLU G:64 G:148 96.0 0.505 H -71.1 -14.9 NA NA NA
GLU H:64 H:148 92.0 0.484 H -74.2 -35.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15194-f1 1 O15194 100.0 0.0 GLU A:153 A:153 100.0 0.526 H -66.5 -42.7