Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 38017230 . C A CCDS33734.1:NM_001008392.1:c.550Cgc>Agc_NP_001008393.1:p.184R>S Homo sapiens CTD small phosphatase like (CTDSPL), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hhl 1 O15194 100.0 5e-134 X-RAY
 2006-08-29 ARG A:106 A:106 160.0 0.711 -93.1 6.4 160.0 0.711 0.0 HOH
 3.053
 CD
 O
ARG B:106 B:106 151.0 0.671 -84.8 -5.6 NA NA NA
ARG C:106 C:106 143.0 0.636 -105.9 4.2 NA NA NA
ARG D:106 D:106 150.0 0.667 -104.0 6.4 NA NA NA
1ta0 1 Q9GZU7 81.67 4e-109 X-RAY
 2004-08-31 LYS A:93 A:168 130.0 0.65 S -99.9 4.7 130.0 0.65 0.0 HOH
 2.690
 NZ
 O
3pgl 1 Q9GZU7 81.67 4e-109 X-RAY
 2011-03-09 LYS A:92 A:168 147.0 0.735 T -64.6 -10.1 147.0 0.735 0.0 HOH
 6.389
 N
 O
LYS B:92 B:168 144.0 0.72 T -63.1 -29.5 NA NA NA
1t9z 1 Q9GZU7 81.11 7e-109 X-RAY
 2004-08-31 LYS A:93 A:168 135.0 0.675 S -95.1 0.9 135.0 0.675 0.0 HOH
 3.381
 CG
 O
2ghq 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 LYS A:93 A:168 137.0 0.685 T -69.3 -28.8 137.0 0.685 0.0 HOH
 3.225
 CE
 O
LYS B:93 B:168 152.0 0.76 T -71.2 -10.1 NA NA NA
2ght 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 LYS A:93 A:168 140.0 0.7 T -75.4 -17.7 140.0 0.7 0.0 HOH
 5.101
 N
 O
LYS B:93 B:168 148.0 0.74 T -81.8 -7.9 NA NA NA
6du2 1 A0A1S2ZIN9 81.11 1e-108 X-RAY
 2018-09-26 LYS A:92 A:168 144.0 0.72 T -73.7 -5.6 144.0 0.72 0.0 HOH
 9.409
 N
 O
LYS B:92 B:168 142.0 0.71 T -67.6 -25.8 NA NA NA
6du3 1 Q9GZU7 81.11 1e-108 X-RAY
 2018-09-26 LYS A:92 A:168 145.0 0.725 S -78.1 -7.0 145.0 0.725 0.0 HOH
 6.542
 N
 O
LYS B:92 B:168 128.0 0.64 T -69.3 -5.5 NA NA NA
4ygy 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 LYS A:96 A:168 158.0 0.79 T -56.1 -29.8 158.0 0.79 0.0 HOH
 5.345
 NZ
 O
LYS B:96 B:168 149.0 0.745 T -64.8 -18.1 NA NA NA
4yh1 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 LYS A:96 A:168 141.0 0.705 T -58.8 -31.5 141.0 0.705 0.0 HOH
 2.801
 NZ
 O
LYS B:96 B:168 146.0 0.73 T -65.6 -14.0 NA NA NA
3l0y 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 LYS A:96 A:168 143.0 0.715 T -70.9 -13.3 143.0 0.715 0.0 HOH
 2.805
 O
 O
LYS B:96 B:168 148.0 0.74 T -67.0 -17.6 NA NA NA
3l0b 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 LYS A:96 A:168 144.0 0.72 T -62.2 -10.2 144.0 0.72 0.0 HOH
 6.262
 N
 O
LYS B:96 B:168 138.0 0.69 T -68.9 -13.4 NA NA NA
3l0c 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 LYS A:96 A:168 137.0 0.685 S -77.7 -10.4 137.0 0.685 0.0 HOH
 9.370
 N
 O
LYS B:96 B:168 141.0 0.705 T -64.0 -23.3 NA NA NA
2q5e 1 O14595 82.12 3e-104 X-RAY
 2007-06-19 ARG A:95 A:179 160.0 0.711 T -62.6 -13.0 160.0 0.711 0.0 HOH
 3.704
 N
 O
ARG B:95 B:179 153.0 0.68 T -47.0 -37.6 NA NA NA
ARG C:95 C:179 177.0 0.787 T -68.1 -25.4 NA NA NA
ARG D:95 D:179 187.0 0.831 T -72.6 -24.1 NA NA NA
ARG E:95 E:179 183.0 0.813 S -88.3 -50.8 NA NA NA
ARG F:95 F:179 186.0 0.827 T -64.1 -30.8 NA NA NA
ARG G:95 G:179 189.0 0.84 T -81.6 -49.2 NA NA NA
ARG H:95 H:179 166.0 0.738 T -84.8 -26.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15194-f1 1 O15194 100.0 0.0 ARG A:184 A:184 181.0 0.804 T -74.6 -13.4