Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 38017282 . G A CCDS33734.1:NM_001008392.1:c.602cGt>cAt_NP_001008393.1:p.201R>H Homo sapiens CTD small phosphatase like (CTDSPL), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hhl 1 O15194 100.0 5e-134 X-RAY
 2006-08-29 ARG A:123 A:123 215.0 0.956 T 53.0 50.9 215.0 0.956 0.0 HOH
 2.893
 NH2
 O
ARG B:123 B:123 200.0 0.889 T 39.5 45.1 NA NA NA
ARG C:123 C:123 220.0 0.978 T 39.4 53.0 NA NA NA
ARG D:123 D:123 221.0 0.982 T 35.1 56.3 NA NA NA
1ta0 1 Q9GZU7 81.67 4e-109 X-RAY
 2004-08-31 ARG A:110 A:185 213.0 0.947 T 47.8 52.9 213.0 0.947 0.0 HOH
 2.630
 O
 O
3pgl 1 Q9GZU7 81.67 4e-109 X-RAY
 2011-03-09 ARG A:109 A:185 225.0 1.0 T 57.2 42.4 225.0 1.0 0.0 HOH
 3.089
 N
 O
ARG B:109 B:185 221.0 0.982 T 50.0 43.0 NA NA NA
1t9z 1 Q9GZU7 81.11 7e-109 X-RAY
 2004-08-31 ARG A:110 A:185 213.0 0.947 T 47.4 55.8 213.0 0.947 0.0 HOH
 2.712
 NH2
 O
2ghq 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 ARG A:110 A:185 203.0 0.902 T 36.9 70.6 203.0 0.902 0.0 HOH
 3.264
 CG
 O
ARG B:110 B:185 212.0 0.942 T 51.3 45.7 NA NA NA
2ght 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 ARG A:110 A:185 215.0 0.956 T 56.3 49.8 215.0 0.956 0.0 HOH
 3.929
 CB
 O
ARG B:110 B:185 216.0 0.96 T 45.7 46.6 NA NA NA
6du2 1 A0A1S2ZIN9 81.11 1e-108 X-RAY
 2018-09-26 ARG A:109 A:185 217.0 0.964 T 59.2 49.1 217.0 0.964 0.0
ARG B:109 B:185 206.0 0.916 T 53.9 50.0 NA NA NA
6du3 1 Q9GZU7 81.11 1e-108 X-RAY
 2018-09-26 ARG A:109 A:185 215.0 0.956 T 61.5 48.0 215.0 0.956 0.0
ARG B:109 B:185 213.0 0.947 T 53.1 49.7 NA NA NA
4ygy 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 ARG A:113 A:185 216.0 0.96 T 53.2 44.3 216.0 0.96 0.0 HOH
 2.523
 NH2
 O
ARG B:113 B:185 209.0 0.929 T 57.3 49.8 NA NA NA
4yh1 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 ARG A:113 A:185 221.0 0.982 T 52.6 51.8 221.0 0.982 0.0 HOH
 3.122
 NH2
 O
ARG B:113 B:185 214.0 0.951 T 54.2 45.0 NA NA NA
3l0y 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 ARG A:113 A:185 220.0 0.978 T 53.8 39.8 220.0 0.978 0.0 HOH
 3.330
 N
 O
ARG B:113 B:185 213.0 0.947 T 52.9 46.9 NA NA NA
3l0b 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 ARG A:113 A:185 219.0 0.973 T 48.0 46.6 219.0 0.973 0.0 HOH
 3.236
 N
 O
ARG B:113 B:185 210.0 0.933 T 56.6 44.8 NA NA NA
3l0c 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 ARG A:113 A:185 218.0 0.969 T 52.5 48.7 218.0 0.969 0.0 HOH
 8.881
 O
 O
ARG B:113 B:185 209.0 0.929 T 27.5 71.8 NA NA NA
2q5e 1 O14595 82.12 3e-104 X-RAY
 2007-06-19 GLN A:112 A:196 189.0 1.0 T 21.5 72.4 189.0 1.0 0.0
GLN B:112 B:196 191.0 1.0 T 30.6 71.6 NA NA NA
GLN C:112 C:196 172.0 0.956 T 38.2 43.0 NA NA NA
GLN D:112 D:196 169.0 0.939 T 18.0 62.3 NA NA NA
GLN E:112 E:196 188.0 1.0 T 33.3 71.4 NA NA NA
GLN F:112 F:196 166.0 0.922 T 34.2 66.3 NA NA NA
GLN G:112 G:196 197.0 1.0 T 42.5 59.9 NA NA NA
GLN H:112 H:196 174.0 0.967 T 60.7 38.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15194-f1 1 O15194 100.0 0.0 ARG A:201 A:201 215.0 0.956 T 49.8 41.3