Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 38022254 . G A CCDS33734.1:NM_001008392.1:c.727Gat>Aat_NP_001008393.1:p.243D>N Homo sapiens CTD small phosphatase like (CTDSPL), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hhl 1 O15194 100.0 5e-134 X-RAY
 2006-08-29 ASP A:165 A:165 109.0 0.727 S -161.7 0.2 109.0 0.727 0.0 KEG
HOH
 6.568
3.058
 OD2
N
 O21
O
ASP B:165 B:165 110.0 0.733 S -155.2 6.1 NA NA NA
ASP C:165 C:165 114.0 0.76 S -158.2 -5.3 NA NA NA
ASP D:165 D:165 117.0 0.78 S -159.8 -0.4 NA NA NA
1ta0 1 Q9GZU7 81.67 4e-109 X-RAY
 2004-08-31 ASP A:152 A:227 111.0 0.74 S -170.0 14.8 111.0 0.74 0.0 HOH
 2.530
 OD2
 O
3pgl 1 Q9GZU7 81.67 4e-109 X-RAY
 2011-03-09 ASP A:151 A:227 109.0 0.727 S -148.9 2.0 109.0 0.727 0.0 HOH
 3.148
 OD1
 O
ASP B:151 B:227 113.0 0.753 S -159.3 -2.5 NA NA NA
1t9z 1 Q9GZU7 81.11 7e-109 X-RAY
 2004-08-31 ASP A:152 A:227 114.0 0.76 S -163.5 5.4 114.0 0.76 0.0 HOH
 2.962
 O
 O
2ghq 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 ASP A:152 A:227 108.0 0.72 S -166.4 7.2 108.0 0.72 0.0 HOH
 3.059
 N
 O
ASP B:152 B:227 110.0 0.733 S -162.0 9.1 NA NA NA
2ght 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 ASP A:152 A:227 110.0 0.733 S -158.0 3.1 110.0 0.733 0.0 HOH
 2.723
 OD2
 O
ASP B:152 B:227 108.0 0.72 S -159.6 4.7 NA NA NA
6du2 1 A0A1S2ZIN9 81.11 1e-108 X-RAY
 2018-09-26 ASP A:151 A:227 111.0 0.74 S -160.5 6.8 111.0 0.74 0.0 HOH
 7.573
 C
 O
ASP B:151 B:227 113.0 0.753 S -162.9 10.1 NA NA NA
6du3 1 Q9GZU7 81.11 1e-108 X-RAY
 2018-09-26 ASP A:151 A:227 109.0 0.727 S -159.7 1.9 109.0 0.727 0.0
ASP B:151 B:227 113.0 0.753 S -151.1 0.2 NA NA NA
4ygy 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 ASP A:155 A:227 114.0 0.76 S -160.9 9.3 114.0 0.76 0.0 HOH
 3.008
 OD1
 O
ASP B:155 B:227 113.0 0.753 S -154.2 13.8 NA NA NA
4yh1 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 ASP A:155 A:227 114.0 0.76 S -148.7 1.2 114.0 0.76 0.0 HOH
 3.041
 N
 O
ASP B:155 B:227 114.0 0.76 S -155.9 15.0 NA NA NA
3l0y 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 ASP A:155 A:227 111.0 0.74 S -155.7 12.2 111.0 0.74 0.0 HOH
 3.458
 O
 O
ASP B:155 B:227 112.0 0.747 S -161.2 5.7 NA NA NA
3l0b 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 ASP A:155 A:227 110.0 0.733 S -158.2 8.8 110.0 0.733 0.0 HOH
 3.471
 N
 O
ASP B:155 B:227 112.0 0.747 S -155.6 7.0 NA NA NA
3l0c 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 ASP A:155 A:227 111.0 0.74 S -166.0 9.1 111.0 0.74 0.0 HOH
 3.223
 O
 O
ASP B:155 B:227 122.0 0.813 S -145.4 -0.6 NA NA NA
2q5e 1 O14595 82.12 3e-104 X-RAY
 2007-06-19 ASP A:154 A:238 113.0 0.753 S -157.6 -3.3 113.0 0.753 0.0 HOH
 9.702
 N
 O
ASP B:154 B:238 117.0 0.78 S -156.3 16.0 NA NA NA
ASP C:154 C:238 115.0 0.767 S -152.5 -12.4 NA NA NA
ASP D:154 D:238 114.0 0.76 S -147.4 -16.6 NA NA NA
ASP E:154 E:238 117.0 0.78 S -153.6 -2.2 NA NA NA
ASP F:154 F:238 116.0 0.773 S -164.5 -3.4 NA NA NA
ASP G:154 G:238 115.0 0.767 S -165.7 2.4 NA NA NA
ASP H:154 H:238 113.0 0.753 S -155.8 9.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15194-f1 1 O15194 100.0 0.0 ASP A:243 A:243 119.0 0.793 S -152.8 8.0