Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 38022264 . C A CCDS33734.1:NM_001008392.1:c.737aCg>aAg_NP_001008393.1:p.246T>K Homo sapiens CTD small phosphatase like (CTDSPL), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hhl 1 O15194 100.0 5e-134 X-RAY
 2006-08-29 THR A:168 A:168 113.0 0.807 T -90.0 -3.3 113.0 0.807 0.0 HOH
 3.840
 C
 O
THR B:168 B:168 114.0 0.814 T -86.9 -3.0 NA NA NA
THR C:168 C:168 111.0 0.793 T -94.8 -4.1 NA NA NA
THR D:168 D:168 111.0 0.793 T -98.6 -2.0 NA NA NA
1ta0 1 Q9GZU7 81.67 4e-109 X-RAY
 2004-08-31 SER A:155 A:230 92.0 0.8 T -95.9 0.3 92.0 0.8 0.0 HOH
 2.710
 OG
 O
3pgl 1 Q9GZU7 81.67 4e-109 X-RAY
 2011-03-09 SER A:154 A:230 98.0 0.852 T -97.4 -7.3 98.0 0.852 0.0 HOH
 4.483
 O
 O
SER B:154 B:230 91.0 0.791 T -108.0 -1.2 NA NA NA
1t9z 1 Q9GZU7 81.11 7e-109 X-RAY
 2004-08-31 SER A:155 A:230 96.0 0.835 T -101.4 3.1 96.0 0.835 0.0 HOH
 2.992
 OG
 O
2ghq 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 SER A:155 A:230 95.0 0.826 T -100.0 -1.0 95.0 0.826 0.0 HOH
 6.738
 O
 O
SER B:155 B:230 98.0 0.852 T -93.4 -12.7 NA NA NA
2ght 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 SER A:155 A:230 98.0 0.852 T -98.2 1.3 98.0 0.852 0.0 HOH
 6.534
 C
 O
SER B:155 B:230 99.0 0.861 T -97.5 -1.5 NA NA NA
6du2 1 A0A1S2ZIN9 81.11 1e-108 X-RAY
 2018-09-26 SER A:154 A:230 99.0 0.861 T -78.1 -13.1 99.0 0.861 0.0 HOH
 6.030
 C
 O
SER B:154 B:230 102.0 0.887 T -83.0 -4.0 NA NA NA
6du3 1 Q9GZU7 81.11 1e-108 X-RAY
 2018-09-26 SER A:154 A:230 95.0 0.826 T -85.8 -8.3 95.0 0.826 0.0 HOH
 8.696
 C
 O
SER B:154 B:230 95.0 0.826 T -82.8 -14.6 NA NA NA
4ygy 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 SER A:158 A:230 94.0 0.817 T -93.8 -2.9 94.0 0.817 0.0 HOH
 4.755
 N
 O
SER B:158 B:230 98.0 0.852 T -91.4 -3.4 NA NA NA
4yh1 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 SER A:158 A:230 90.0 0.783 T -93.1 -7.6 90.0 0.783 0.0 HOH
 4.481
 N
 O
SER B:158 B:230 97.0 0.843 T -86.9 -7.4 NA NA NA
3l0y 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 SER A:158 A:230 99.0 0.861 T -95.1 -6.5 99.0 0.861 0.0 HOH
 3.424
 C
 O
SER B:158 B:230 91.0 0.791 T -114.7 15.9 NA NA NA
3l0b 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 SER A:158 A:230 100.0 0.87 T -96.2 -4.8 100.0 0.87 0.0 HOH
 4.306
 O
 O
SER B:158 B:230 91.0 0.791 T -117.0 14.3 NA NA NA
3l0c 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 SER A:158 A:230 96.0 0.835 T -119.4 7.3 96.0 0.835 0.0 HOH
 4.689
 N
 O
SER B:158 B:230 88.0 0.765 T -105.2 -2.3 NA NA NA
2q5e 1 O14595 82.12 3e-104 X-RAY
 2007-06-19 ALA A:157 A:241 80.0 0.696 T -83.8 6.3 80.0 0.696 0.0 HOH
 6.551
 C
 O
ALA B:157 B:241 75.0 0.652 T -89.5 3.4 NA NA NA
ALA C:157 C:241 76.0 0.661 T -107.2 15.6 NA NA NA
ALA D:157 D:241 78.0 0.678 T -75.4 -21.2 NA NA NA
ALA E:157 E:241 74.0 0.643 T -99.5 -0.9 NA NA NA
ALA F:157 F:241 77.0 0.67 T -92.2 3.2 NA NA NA
ALA G:157 G:241 79.0 0.687 T -89.3 19.4 NA NA NA
ALA H:157 H:241 77.0 0.67 T -95.7 2.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15194-f1 1 O15194 100.0 0.0 THR A:246 A:246 113.0 0.807 T -92.8 -2.2