Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 38022320 . G A CCDS33734.1:NM_001008392.1:c.793Gac>Aac_NP_001008393.1:p.265D>N Homo sapiens CTD small phosphatase like (CTDSPL), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hhl 1 O15194 100.0 5e-134 X-RAY
 2006-08-29 ASP A:187 NA:NA DO NA DO DO DO NA NA NA
ASP B:187 NA:NA DO NA DO DO DO NA NA NA
ASP C:187 NA:NA DO NA DO DO DO NA NA NA
ASP D:187 NA:NA DO NA DO DO DO NA NA NA
1ta0 1 Q9GZU7 81.67 4e-109 X-RAY
 2004-08-31 ASP A:174 A:249 47.0 0.313 -137.4 121.0 47.0 0.313 0.0 HOH
 2.486
 OD2
 O
3pgl 1 Q9GZU7 81.67 4e-109 X-RAY
 2011-03-09 ASP A:173 A:249 50.0 0.333 -141.9 110.9 50.0 0.333 0.0 HOH
 2.870
 OD2
 O
ASP B:173 B:249 63.0 0.42 -150.1 108.2 NA NA NA
1t9z 1 Q9GZU7 81.11 7e-109 X-RAY
 2004-08-31 ASP A:174 A:249 47.0 0.313 -138.3 119.0 47.0 0.313 0.0 HOH
 2.731
 OD2
 O
2ghq 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 ASP A:174 A:249 48.0 0.32 -149.9 105.8 48.0 0.32 0.0 HOH
 5.092
 OD2
 O
ASP B:174 B:249 47.0 0.313 -131.7 116.9 NA NA NA
2ght 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 ASP A:174 A:249 47.0 0.313 -136.6 114.0 47.0 0.313 0.0 HOH
 3.518
 O
 O
ASP B:174 B:249 51.0 0.34 -136.5 111.2 NA NA NA
6du2 1 A0A1S2ZIN9 81.11 1e-108 X-RAY
 2018-09-26 ASP A:173 A:249 50.0 0.333 -140.0 110.5 50.0 0.333 0.0 HOH
 9.162
 N
 O
ASP B:173 B:249 54.0 0.36 -144.6 111.6 NA NA NA
6du3 1 Q9GZU7 81.11 1e-108 X-RAY
 2018-09-26 ASP A:173 A:249 50.0 0.333 -143.1 110.8 50.0 0.333 0.0 HOH
 2.805
 OD2
 O
ASP B:173 B:249 44.0 0.293 -141.6 118.3 NA NA NA
4ygy 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 ASP A:177 A:249 45.0 0.3 -153.4 116.0 45.0 0.3 0.0 HOH
 9.311
 N
 O
ASP B:177 B:249 53.0 0.353 -140.8 109.7 NA NA NA
4yh1 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 ASP A:177 A:249 51.0 0.34 -141.3 111.9 51.0 0.34 0.0 HOH
 6.314
 N
 O
ASP B:177 B:249 49.0 0.327 -138.0 110.2 NA NA NA
3l0y 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 ASP A:177 A:249 51.0 0.34 -136.1 111.8 51.0 0.34 0.0 HOH
 2.698
 OD2
 O
ASP B:177 B:249 53.0 0.353 -145.7 112.1 NA NA NA
3l0b 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 ASP A:177 A:249 53.0 0.353 -133.2 110.5 53.0 0.353 0.0 HOH
 2.613
 OD2
 O
ASP B:177 B:249 51.0 0.34 -144.3 111.3 NA NA NA
3l0c 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 ASP A:177 A:249 52.0 0.347 -137.2 119.1 52.0 0.347 0.0 HOH
 8.914
 N
 O
ASP B:177 B:249 50.0 0.333 -159.7 117.7 NA NA NA
2q5e 1 O14595 82.12 3e-104 X-RAY
 2007-06-19 ASP A:176 A:260 42.0 0.28 -147.9 116.0 42.0 0.28 0.0 HOH
 2.841
 N
 O
ASP B:176 B:260 39.0 0.26 -135.3 103.2 NA NA NA
ASP C:176 C:260 45.0 0.3 -149.4 115.6 NA NA NA
ASP D:176 D:260 53.0 0.353 -154.3 99.1 NA NA NA
ASP E:176 E:260 56.0 0.373 -137.0 89.9 NA NA NA
ASP F:176 F:260 49.0 0.327 -154.7 101.8 NA NA NA
ASP G:176 G:260 49.0 0.327 -127.8 110.0 NA NA NA
ASP H:176 H:260 47.0 0.313 -144.0 110.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15194-f1 1 O15194 100.0 0.0 ASP A:265 A:265 65.0 0.433 S -120.1 150.7