Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 38022341 . A C CCDS33734.1:NM_001008392.1:c.814Aga>Cga_NP_001008393.1:p.272R>R Homo sapiens CTD small phosphatase like (CTDSPL), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ta0 1 Q9GZU7 81.67 4e-109 X-RAY
 2004-08-31 GLN A:181 A:256 121.0 0.672 -149.8 360.0 121.0 0.672 0.0 HOH
 2.565
 NE2
 O
3pgl 1 Q9GZU7 81.67 4e-109 X-RAY
 2011-03-09 GLN A:180 A:256 150.0 NA -115.3 360.0 150.0 NA NA HOH
 3.087
 OE1
 O
GLN B:180 B:256 166.0 NA -129.0 360.0 NA NA NA
1t9z 1 Q9GZU7 81.11 7e-109 X-RAY
 2004-08-31 GLN A:181 A:256 134.0 0.744 143.3 360.0 134.0 0.744 0.0 HOH
 2.780
 NE2
 O
2ghq 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 GLN A:181 A:256 146.0 NA -169.2 360.0 146.0 NA NA HOH
 2.697
 O
 O
GLN B:181 B:256 157.0 NA 177.2 360.0 NA NA NA
2ght 1 Q9GZU7 81.11 1e-108 X-RAY
 2006-12-05 GLN A:181 A:256 161.0 NA 179.3 360.0 161.0 NA NA HOH
 2.552
 O
 O
GLN B:181 B:256 142.0 NA 177.9 360.0 NA NA NA
6du2 1 A0A1S2ZIN9 81.11 1e-108 X-RAY
 2018-09-26 GLN A:180 A:256 99.0 NA -31.5 360.0 99.0 NA NA
GLN B:180 B:256 121.0 NA -90.4 360.0 NA NA NA
6du3 1 Q9GZU7 81.11 1e-108 X-RAY
 2018-09-26 GLN A:180 A:256 135.0 0.75 -157.8 360.0 135.0 0.75 0.0 HOH
 4.303
 O
 O
GLN B:180 B:256 167.0 0.928 -36.0 360.0 NA NA NA
4ygy 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 GLN A:184 NA:NA DO NA DO DO DO NA NA NA
GLN B:184 NA:NA DO NA DO DO DO NA NA NA
4yh1 1 Q9GZU7 80.66 3e-108 X-RAY
 2015-09-16 GLN A:184 NA:NA DO NA DO DO DO NA NA NA
GLN B:184 NA:NA DO NA DO DO DO NA NA NA
3l0y 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 GLN A:184 NA:NA DO NA DO DO DO NA NA NA
GLN B:184 NA:NA DO NA DO DO DO NA NA NA
3l0b 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 GLN A:184 A:256 150.0 NA -159.4 360.0 150.0 NA NA HOH
 2.971
 NE2
 O
GLN B:184 B:256 177.0 NA 127.1 360.0 NA NA NA
3l0c 1 Q9GZU7 80.66 4e-108 X-RAY
 2010-03-23 GLN A:184 NA:NA DO NA DO DO DO NA NA NA
GLN B:184 NA:NA DO NA DO DO DO NA NA NA
2q5e 1 O14595 82.12 3e-104 X-RAY
 2007-06-19 GLN A:183 A:267 126.0 0.7 H -72.2 -28.2 126.0 0.7 0.0 HOH
 2.794
 O
 O
GLN B:183 B:267 154.0 0.856 T -72.8 17.5 NA NA NA
GLN C:183 C:267 143.0 0.794 H -59.5 -60.6 NA NA NA
GLN D:183 NA:NA DO NA DO DO DO NA NA NA
GLN E:183 E:267 186.0 1.0 -90.4 360.0 NA NA NA
GLN F:183 F:267 160.0 0.889 H -54.4 -47.9 NA NA NA
GLN G:183 G:267 136.0 0.756 H -70.0 -31.5 NA NA NA
GLN H:183 H:267 149.0 0.828 T -88.7 20.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o15194-f1 1 O15194 100.0 0.0 ARG A:272 A:272 140.0 0.622 H -76.5 -25.5