Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 48884945 | . | G | A | CCDS2778.1:NM_004157.2:c.85Ctc>Ttc_NP_004148.1:p.29L>F | Homo sapiens protein kinase cAMP-dependent type II regulatory subunit alpha (PRKAR2A), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
3j4q | 2 | Q8K1M3 | 87.13 | 0.0 |
EM |
2013-11-13 | LEU | B:29 | B:29 | 92.0 | 0.541 | H | -64.0 | -33.2 | 41.0 | 0.241 | 0.3 |
C:Q8K1M3:0.3 |
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LEU | C:29 | C:29 | 98.0 | 0.576 | H | -64.4 | -40.1 | 37.0 | 0.218 | 0.358 |
B:Q8K1M3:0.359 |
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3j4r | 2 | Q8K1M3 | 87.13 | 0.0 |
EM |
2013-11-13 | LEU | B:29 | B:29 | 90.0 | 0.529 | H | -64.0 | -33.3 | 38.0 | 0.224 | 0.305 |
C:Q8K1M3:0.306 |
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LEU | C:29 | C:29 | 92.0 | 0.541 | H | -64.6 | -32.8 | 39.0 | 0.229 | 0.312 |
B:Q8K1M3:0.312 |
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2kyg | 1 | P13861 | 100.0 | 3e-24 |
NMR |
2010-10-20 | LEU | A:34 | A:28 | 121.0 | 0.712 | H | -92.4 | -43.8 | 30.0 | 0.176 | 0.536 |
B:P13861:0.535 |
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LEU | B:34 | B:28 | 107.0 | 0.629 | H | -73.1 | -44.2 | 35.0 | 0.206 | 0.423 |
A:P13861:0.424 |
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2hwn | 1 | P12368 | 97.73 | 7e-23 |
X-RAY |
2006-11-21 | LEU | A:29 | A:28 | 97.0 | 0.571 | H | -64.1 | -40.6 | 23.0 | 0.135 | 0.436 |
B:P12368:0.435 |
HOH |
2.841 |
N |
O |
|
LEU | B:29 | B:28 | 90.0 | 0.529 | H | -67.9 | -34.8 | 16.0 | 0.094 | 0.435 |
A:P12368:0.435 |
HOH |
2.947 |
N |
O |
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LEU | C:29 | C:28 | 98.0 | 0.576 | H | -64.9 | -40.3 | NA | NA | NA | |||||||||||||
LEU | D:29 | D:28 | 93.0 | 0.547 | H | -70.3 | -37.0 | NA | NA | NA | |||||||||||||
4zp3 | 1 | P13861 | 100.0 | 1e-22 |
X-RAY |
2016-05-04 | LEU | A:28 | A:28 | 91.0 | 0.535 | H | -67.0 | -32.8 | 19.0 | 0.112 | 0.423 |
B:P13861:0.424 |
HOH |
5.238 |
N |
O |
|
LEU | B:28 | B:28 | 91.0 | 0.535 | H | -71.6 | -31.2 | 24.0 | 0.141 | 0.394 |
A:P13861:0.394 |
HOH |
4.102 |
CD2 |
O |
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LEU | C:28 | C:28 | 92.0 | 0.541 | H | -73.7 | -36.3 | NA | NA | NA | |||||||||||||
LEU | D:28 | D:28 | 95.0 | 0.559 | H | -63.1 | -37.2 | NA | NA | NA | |||||||||||||
LEU | E:28 | E:28 | 90.0 | 0.529 | H | -67.4 | -33.4 | NA | NA | NA | |||||||||||||
LEU | F:28 | F:28 | 91.0 | 0.535 | H | -67.9 | -29.1 | NA | NA | NA | |||||||||||||
LEU | G:28 | G:28 | 93.0 | 0.547 | H | -61.0 | -20.1 | NA | NA | NA | |||||||||||||
LEU | H:28 | H:28 | 92.0 | 0.541 | H | -66.8 | -27.2 | NA | NA | NA | |||||||||||||
LEU | I:28 | I:28 | 95.0 | 0.559 | H | -74.3 | -40.6 | NA | NA | NA | |||||||||||||
LEU | J:28 | J:28 | 93.0 | 0.547 | H | -67.1 | -34.3 | NA | NA | NA | |||||||||||||
LEU | K:28 | K:28 | 90.0 | 0.529 | H | -71.9 | -26.3 | NA | NA | NA | |||||||||||||
LEU | L:28 | L:28 | 93.0 | 0.547 | H | -74.9 | -37.3 | NA | NA | NA | |||||||||||||
3tmh | 2 | P12368 | 95.45 | 3e-22 |
X-RAY |
2012-09-05 | LEU | B:32 | B:28 | 76.0 | 0.447 | -110.5 | -58.6 | 42.0 | 0.247 | 0.2 |
C:P12368:0.2 |
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LEU | C:32 | C:28 | 74.0 | 0.435 | S | -110.7 | -58.8 | 60.0 | 0.353 | 0.082 |
B:P12368:0.082 |
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LEU | F:32 | F:28 | 76.0 | 0.447 | S | -110.1 | -59.0 | 58.0 | 0.341 | 0.106 |
G:P12368:0.106 |
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LEU | G:32 | G:28 | 74.0 | 0.435 | S | -106.0 | -43.2 | 59.0 | 0.347 | 0.088 |
F:P12368:0.088 |
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2izy | 1 | P12368 | 95.45 | 4e-22 |
X-RAY |
2006-11-13 | LEU | A:29 | A:30 | 98.0 | 0.576 | H | -68.6 | -37.0 | 20.0 | 0.118 | 0.458 |
F:P12368:0.118 B:P12368:0.424 |
HOH |
3.068 |
N |
O |
|
LEU | B:29 | B:30 | 96.0 | 0.565 | H | -67.1 | -35.3 | 19.0 | 0.112 | 0.453 |
D:P12368:0.112 A:P12368:0.394 |
HOH |
3.147 |
N |
O |
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LEU | C:29 | C:30 | 95.0 | 0.559 | H | -68.2 | -32.2 | 20.0 | 0.118 | 0.441 |
D:P12368:0.406 A:P12368:0.106 |
HOH |
2.817 |
N |
O |
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LEU | D:29 | D:30 | 100.0 | 0.588 | H | -63.8 | -34.9 | 29.0 | 0.171 | 0.417 |
C:P12368:0.418 |
HOH |
3.401 |
N |
O |
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LEU | E:29 | E:30 | 96.0 | 0.565 | H | -64.3 | -41.6 | 22.0 | 0.129 | 0.436 |
F:P12368:0.388 B:P12368:0.106 |
HOH |
2.823 |
N |
O |
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LEU | F:29 | F:30 | 95.0 | 0.559 | H | -63.3 | -37.9 | 19.0 | 0.112 | 0.447 |
H:P12368:0.1 E:P12368:0.406 |
HOH |
3.079 |
N |
O |
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LEU | G:29 | G:30 | 98.0 | 0.576 | H | -65.8 | -39.2 | 23.0 | 0.135 | 0.441 |
H:P12368:0.388 E:P12368:0.106 |
HOH |
3.014 |
N |
O |
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LEU | H:29 | H:30 | 98.0 | 0.576 | H | -58.6 | -37.8 | 26.0 | 0.153 | 0.423 |
G:P12368:0.424 |
HOH |
2.926 |
N |
O |
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5h78 | 1 | P13861 | 93.02 | 3e-21 |
X-RAY |
2017-06-28 | LEU | A:29 | A:28 | 93.0 | 0.547 | H | -70.9 | -27.7 | 23.0 | 0.135 | 0.412 |
B:P13861:0.412 |
HOH |
3.091 |
N |
O |
|
LEU | B:29 | B:28 | 89.0 | 0.524 | H | -72.7 | -28.9 | 20.0 | 0.118 | 0.406 |
A:P13861:0.406 |
HOH |
3.181 |
N |
O |
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2izx | 1 | P13861 | 100.0 | 1e-20 |
X-RAY |
2006-11-08 | LEU | A:26 | A:28 | 91.0 | 0.535 | H | -64.6 | -32.7 | 19.0 | 0.112 | 0.423 |
B:P13861:0.424 |
DTD HOH |
8.642 2.872 |
O N |
S4 O |
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LEU | B:26 | B:28 | 91.0 | 0.535 | H | -64.0 | -33.2 | 20.0 | 0.118 | 0.417 |
A:P13861:0.418 |
HOH |
2.910 |
N |
O |
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5xby | 1 | P13861,P38507 | 95.35 | 2e-20 |
X-RAY |
2017-07-05 | LEU | A:29 | A:28 | 99.0 | 0.582 | H | -55.4 | -36.7 | 28.0 | 0.165 | 0.417 |
B:P13861+P38507:0.418 |
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LEU | B:29 | B:28 | 100.0 | 0.588 | H | -61.1 | -35.4 | 28.0 | 0.165 | 0.423 |
A:P13861+P38507:0.424 |
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LEU | C:29 | C:28 | 96.0 | 0.565 | H | -62.0 | -35.6 | NA | NA | NA | |||||||||||||
LEU | D:29 | D:28 | 98.0 | 0.576 | H | -62.1 | -35.9 | NA | NA | NA | |||||||||||||
5h77 | 1 | P13861,P38507 | 83.67 | 7e-20 |
X-RAY |
2017-06-28 | LEU | A:29 | A:26 | 97.0 | 0.571 | H | -70.5 | -31.9 | 27.0 | 0.159 | 0.412 |
B:P13861+P38507:0.412 |
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LEU | B:29 | B:26 | 95.0 | 0.559 | H | -72.2 | -31.7 | 23.0 | 0.135 | 0.424 |
A:P13861+P38507:0.424 |
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LEU | C:29 | C:26 | 93.0 | 0.547 | H | -72.1 | -30.9 | NA | NA | NA | |||||||||||||
LEU | D:29 | D:26 | 97.0 | 0.571 | H | -73.8 | -30.9 | NA | NA | NA | |||||||||||||
LEU | E:29 | E:26 | 99.0 | 0.582 | H | -73.5 | -32.2 | NA | NA | NA | |||||||||||||
LEU | F:29 | F:26 | 95.0 | 0.559 | H | -71.5 | -31.9 | NA | NA | NA | |||||||||||||
LEU | G:29 | G:26 | 89.0 | 0.524 | H | -74.8 | -30.9 | NA | NA | NA | |||||||||||||
LEU | H:29 | H:26 | 93.0 | 0.547 | H | -72.6 | -30.5 | NA | NA | NA | |||||||||||||
LEU | I:29 | I:26 | 96.0 | 0.565 | H | -72.4 | -32.1 | NA | NA | NA | |||||||||||||
LEU | J:29 | J:26 | 96.0 | 0.565 | H | -72.6 | -31.3 | NA | NA | NA | |||||||||||||
LEU | K:29 | K:26 | 97.0 | 0.571 | H | -72.3 | -29.0 | NA | NA | NA | |||||||||||||
LEU | L:29 | L:26 | 94.0 | 0.553 | H | -73.4 | -31.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p13861-f1 | 1 | P13861 | 100.0 | 0.0 | LEU | A:29 | A:29 | 95.0 | 0.559 | H | -74.9 | -27.5 |