Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr4 | 100815116 | . | G | A | CCDS3652.1:NM_021970.3:c.5gCg>gTg_NP_068805.1:p.2A>V | Homo sapiens late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 (LAMTOR3), transcript variant 1, mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5y39 | 3 | Q9UHA4 | 100.0 | 4e-88 |
X-RAY |
2017-12-06 | ALA | C:2 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| ALA | H:2 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5y3a | 3 | Q9UHA4 | 100.0 | 4e-88 |
X-RAY |
2017-12-27 | ALA | C:2 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| ALA | H:2 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5yk3 | 1 | Q9UHA4 | 100.0 | 4e-88 |
X-RAY |
2019-01-23 | ALA | A:2 | m:2 | 70.0 | 0.609 | H | -58.7 | -33.3 | 13.0 | 0.113 | 0.496 |
E:Q6IAA8:0.496 |
|||||
| ALA | K:2 | H:2 | 57.0 | 0.496 | H | -60.4 | -30.8 | NA | NA | NA | |||||||||||||
| 6b9x | 3 | Q9UHA4 | 100.0 | 4e-88 |
X-RAY |
2017-11-08 | ALA | C:2 | C:2 | 103.0 | 0.896 | 360.0 | 118.8 | 103.0 | 0.896 | 0.0 |
HOH |
6.160 |
CA |
O |
|||
| 6nzd | 3 | Q9UHA4 | 100.0 | 4e-88 |
EM |
2019-11-06 | ALA | C:2 | C:2 | 100.0 | 0.87 | 360.0 | 118.8 | 100.0 | 0.87 | 0.0 | |||||||
| 6ulg | 2 | Q9UHA4 | 100.0 | 4e-88 |
EM |
2019-11-20 | ALA | B:2 | A:2 | 111.0 | 0.965 | 360.0 | -12.3 | 55.0 | 0.478 | 0.487 |
F:Q6IAA8:0.487 |
||||||
| 6wj2 | 3 | Q9UHA4 | 100.0 | 4e-88 |
EM |
2020-09-02 | ALA | C:2 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 6wj3 | 3 | Q9UHA4 | 100.0 | 4e-88 |
EM |
2020-09-02 | ALA | C:2 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 6ehp | 1 | Q9UHA4 | 100.0 | 4e-88 |
X-RAY |
2017-10-04 | ALA | A:5 | A:2 | 73.0 | 0.635 | H | -71.8 | -37.1 | 32.0 | 0.278 | 0.357 |
E:Q6IAA8:0.357 |
HOH |
6.653 |
O |
O |
|
| 6ehr | 1 | Q9UHA4 | 100.0 | 4e-88 |
X-RAY |
2017-10-04 | ALA | A:5 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 6u62 | 6 | Q9UHA4 | 100.0 | 1e-87 |
EM |
2019-10-30 | ALA | F:2 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 5x6u | 1 | Q9UHA4 | 100.0 | 3e-87 |
X-RAY |
2017-12-06 | ALA | A:5 | A:2 | 48.0 | 0.417 | H | -68.5 | -31.7 | 13.0 | 0.113 | 0.304 |
E:Q6IAA8:0.304 |
HOH |
6.846 |
O |
O |
|
| 5x6v | 1 | Q9UHA4 | 100.0 | 3e-87 |
X-RAY |
2017-12-06 | ALA | A:5 | A:2 | 90.0 | 0.783 | 360.0 | -29.2 | 23.0 | 0.2 | 0.583 |
E:Q6IAA8:0.583 |
HOH |
5.405 |
CB |
O |
||
| 1sko | 1 | Q9UHA4 | 100.0 | 4e-87 |
X-RAY |
2004-06-01 | ALA | A:21 | A:3 | 56.0 | 0.487 | H | -65.3 | -49.1 | 56.0 | 0.487 | 0.0 |
HOH |
3.107 |
N |
O |
||
| 3cpt | 1 | Q9UHA4 | 100.0 | 4e-87 |
X-RAY |
2008-07-01 | ALA | A:21 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 5yk3 | 6 | Q9UHA4 | 100.0 | 2e-86 |
X-RAY |
2019-01-23 | ALA | F:2 | C:2 | 72.0 | 0.626 | H | -59.2 | -41.2 | NA | NA | NA | ||||||
| 2zl1 | 1 | Q9UHA4 | 98.37 | 1e-85 |
X-RAY |
2008-06-24 | ALA | A:21 | A:2 | 90.0 | 0.783 | 360.0 | 28.6 | 90.0 | 0.783 | 0.0 |
HOH |
3.744 |
N |
O |
|||
| 1vet | 1 | O88653 | 97.58 | 3e-85 |
X-RAY |
2004-08-03 | ALA | A:2 | A:2 | 161.0 | 1.0 | 360.0 | 25.2 | 161.0 | 1.0 | 0.0 |
HOH |
2.778 |
CB |
O |
|||
| 1veu | 1 | O88653 | 97.58 | 3e-85 |
X-RAY |
2004-08-03 | ALA | A:2 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q9uha4-f1 | 1 | Q9UHA4 | 100.0 | 2e-88 | ALA | A:2 | A:2 | 61.0 | 0.53 | H | -58.0 | -40.2 | |