Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 103505891 . C A CCDS3657.1:NM_003998.3:c.980cCa>cAa_NP_003989.2:p.327P>Q Homo sapiens nuclear factor kappa B subunit 1 (NFKB1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1svc 2 P19838 99.73 0.0 X-RAY
 1996-06-10 PRO B:326 P:327 75.0 0.517 -65.0 160.0 75.0 0.517 0.0 HOH
 8.104
 O
 O
2v2t 2 P25799 98.16 0.0 X-RAY
 2007-07-03 PRO B:287 B:324 74.0 0.51 -59.2 147.5 74.0 0.51 0.0
1nfk 2 P25799 98.15 0.0 X-RAY
 1996-12-23 PRO C:286 A:324 80.0 0.552 S -58.2 99.1 80.0 0.552 0.0 HOH
 3.436
 O
 H1
PRO D:286 B:324 59.0 0.407 -53.0 135.4 59.0 0.407 0.0 HOH
 1.792
 O
 H1
1ooa 2 P25799 98.15 0.0 X-RAY
 2003-07-22 PRO C:287 A:324 81.0 0.559 -57.9 150.6 81.0 0.559 0.0 HOH
 3.938
 O
 O
PRO D:287 B:324 83.0 0.572 -58.9 150.4 NA NA NA
2o61 4 P19838 100.0 0.0 X-RAY
 2007-07-24 PRO D:288 B:324 73.0 0.503 -46.7 112.0 73.0 0.503 0.0
1le5 4 P25799 98.08 0.0 X-RAY
 2003-04-15 PRO F:287 B:324 81.0 0.559 -51.1 137.8 81.0 0.559 0.0 HOH
 9.110
 O
 O
PRO H:287 F:324 82.0 0.566 -55.4 137.9 NA NA NA
1le9 4 P25799 98.08 0.0 X-RAY
 2003-04-15 PRO F:287 B:324 66.0 0.455 -57.4 151.9 66.0 0.455 0.0
PRO H:287 F:324 72.0 0.497 -60.2 153.3 NA NA NA
1lei 4 P25799 98.08 0.0 X-RAY
 2003-04-15 PRO D:287 B:324 55.0 0.379 -50.8 148.8 55.0 0.379 0.0
2i9t 4 P25799 98.08 0.0 X-RAY
 2007-02-06 PRO D:287 B:624 81.0 0.559 -69.7 141.3 81.0 0.559 0.0
1vkx 4 P25799 98.08 0.0 X-RAY
 1998-12-09 PRO D:286 B:624 66.0 0.455 -43.5 129.1 66.0 0.455 0.0
3gut 2 P19838 98.08 0.0 X-RAY
 2009-09-08 PRO B:286 B:624 76.0 0.524 -48.2 152.7 76.0 0.524 0.0
PRO D:286 D:624 74.0 0.51 -62.4 150.5 74.0 0.51 0.0
PRO F:286 F:624 76.0 0.524 -46.8 150.7 NA NA NA
PRO H:286 H:624 72.0 0.497 -56.8 150.3 NA NA NA
1ikn 2 P25799 99.16 5e-80 X-RAY
 1999-04-12 PRO B:80 C:324 70.0 0.483 -56.8 153.7 28.0 0.193 0.29 C:P25963:0.29
 HOH
 4.452
 O
 O
3jv4 2 P25799 99.13 4e-77 X-RAY
 2010-11-24 PRO B:80 B:324 76.0 0.524 -49.8 144.1 76.0 0.524 0.0
PRO D:80 D:324 85.0 0.586 -61.7 148.5 NA NA NA
PRO F:80 F:324 82.0 0.566 -60.5 149.1 NA NA NA
1nfi 2 P19838 100.0 4e-72 X-RAY
 1998-11-18 PRO B:79 B:327 77.0 0.531 -58.4 150.8 44.0 0.303 0.228 F:P25963:0.228
PRO D:79 D:327 75.0 0.517 -58.4 151.2 NA NA NA
1u36 1 P25799 97.17 3e-70 X-RAY
 2004-08-17 PRO A:80 A:324 75.0 0.517 -59.2 147.4 75.0 0.517 0.0 HOH
 2.522
 O
 O
1u41 1 P25799 98.11 3e-70 X-RAY
 2004-08-17 PRO A:80 A:324 78.0 0.538 -59.0 149.3 78.0 0.538 0.0 HOH
 2.670
 O
 O
PRO B:80 B:324 69.0 0.476 -53.9 141.2 69.0 0.476 0.0 HOH
 4.071
 O
 O
PRO C:80 C:324 74.0 0.51 -61.6 144.4 NA NA NA
PRO D:80 D:324 63.0 0.434 -44.8 137.1 NA NA NA
1bfs 1 P25799 99.06 2e-69 X-RAY
 1998-01-28 PRO A:80 A:324 67.0 0.462 -42.6 135.6 67.0 0.462 0.0 HOH
 1.976
 O
 H1
1u3y 1 P25799 97.17 2e-69 X-RAY
 2004-08-17 PRO A:80 A:324 78.0 0.538 -59.9 146.6 78.0 0.538 0.0 HOH
 2.594
 O
 O
1u3j 1 P25799 98.11 2e-68 X-RAY
 2004-08-17 PRO A:80 A:324 77.0 0.531 -59.8 144.1 77.0 0.531 0.0 HOH
 2.485
 O
 O
1u42 1 P25799 97.17 4e-68 X-RAY
 2004-08-17 PRO A:80 A:324 81.0 0.559 -54.5 132.9 81.0 0.559 0.0 HOH
 4.907
 O
 O
1u3z 1 P25799 97.17 7e-68 X-RAY
 2004-08-17 PRO A:80 A:324 71.0 0.49 -62.7 146.1 71.0 0.49 0.0 HOH
 2.445
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p19838-f1 1 P19838 99.9 0.0 PRO A:326 A:326 75.0 0.517 -61.1 144.1