Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr4 | 123813469 | . | G | A | CCDS34059.1:NM_002006.4:c.785cGa>cAa_NP_001997.5:p.262R>Q | Homo sapiens fibroblast growth factor 2 (FGF2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1ii4 | 1 | P09038 | 98.71 | 1e-111 |
X-RAY |
2001-05-09 | ARG | A:129 | A:129 | 61.0 | NA | T | -61.7 | -10.7 | 61.0 | NA | NA | ||||||
ARG | B:129 | B:129 | 63.0 | NA | T | -61.8 | -10.3 | NA | NA | NA | |||||||||||||
ARG | C:129 | C:129 | 65.0 | NA | T | -60.2 | -14.0 | NA | NA | NA | |||||||||||||
ARG | D:129 | D:129 | 62.0 | NA | T | -60.7 | -13.4 | NA | NA | NA | |||||||||||||
1iil | 1 | P09038 | 98.71 | 1e-111 |
X-RAY |
2001-05-09 | ARG | A:129 | A:129 | 63.0 | NA | T | -59.8 | -18.2 | 63.0 | NA | NA | ||||||
ARG | B:129 | B:129 | 62.0 | NA | T | -60.1 | -18.4 | NA | NA | NA | |||||||||||||
ARG | C:129 | C:129 | 66.0 | NA | T | -58.1 | -21.7 | NA | NA | NA | |||||||||||||
ARG | D:129 | D:129 | 65.0 | NA | T | -58.3 | -21.1 | NA | NA | NA | |||||||||||||
4oee | 1 | P09038 | 98.71 | 1e-111 |
X-RAY |
2014-07-09 | ARG | A:129 | A:120 | 165.0 | 0.733 | T | -62.8 | -13.9 | 165.0 | 0.733 | 0.0 |
IDY GNX HOH |
2.992 2.941 2.750 |
NH1 N O |
O3 O3S O |
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4oef | 1 | P09038 | 98.71 | 1e-111 |
X-RAY |
2014-07-09 | ARG | A:129 | A:120 | 148.0 | 0.658 | T | -62.9 | -19.8 | 148.0 | 0.658 | 0.0 |
IDY SGN HOH |
3.123 2.866 2.225 |
CG N NH1 |
O3 O3S O |
||
4oeg | 1 | P09038 | 98.71 | 1e-111 |
X-RAY |
2014-07-09 | ARG | A:129 | A:120 | 152.0 | 0.676 | T | -63.0 | -17.4 | 152.0 | 0.676 | 0.0 |
IDY SUS HOH |
3.055 2.868 2.550 |
CG N NE |
O3 O1S O |
||
1bas | 1 | P09038 | 98.7 | 1e-110 |
X-RAY |
1993-10-31 | ARG | A:128 | A:121 | 58.0 | NA | T | -85.8 | 9.7 | 58.0 | NA | NA |
HOH |
2.978 |
N |
O |
||
6l4o | 2 | P09038 | 98.7 | 2e-110 |
X-RAY |
2020-04-29 | ARG | B:150 | B:262 | 190.0 | 0.844 | T | -65.0 | -28.4 | 37.0 | 0.164 | 0.68 |
A:Q9BZZ5:0.68 |
HOH |
3.752 |
NH2 |
O |
|
1fga | 1 | P09038 | 100.0 | 5e-107 |
X-RAY |
1993-07-15 | ARG | A:120 | A:120 | 148.0 | 0.658 | T | -67.8 | -18.8 | 148.0 | 0.658 | 0.0 |
SE4 SE4 HOH |
2.429 2.688 2.366 |
NH2 NH1 NH2 |
O2 O4 O |
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2fgf | 1 | P09038 | 100.0 | 5e-107 |
X-RAY |
1992-01-15 | ARG | A:120 | A:120 | 191.0 | 0.849 | T | -57.9 | -18.3 | 191.0 | 0.849 | 0.0 |
SO4 SO4 HOH |
2.950 9.747 2.840 |
N CD O |
O4 O2 O |
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4fgf | 1 | P09038 | 100.0 | 5e-107 |
X-RAY |
1993-07-15 | ARG | A:120 | A:120 | 183.0 | 0.813 | T | -68.2 | -10.2 | 183.0 | 0.813 | 0.0 |
SO4 HOH |
2.989 2.975 |
N O |
O1 O |
||
5x1o | 1 | P09038 | 100.0 | 5e-107 |
X-RAY |
2018-03-07 | ARG | A:120 | A:120 | 140.0 | 0.622 | T | -58.0 | -18.0 | 140.0 | 0.622 | 0.0 |
HOH |
2.914 |
N |
O |
||
ARG | B:120 | B:120 | 152.0 | 0.676 | T | -58.3 | -19.8 | 152.0 | 0.676 | 0.0 |
HOH |
2.508 |
NH2 |
O |
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1bfb | 1 | P09038 | 98.64 | 2e-105 |
X-RAY |
1996-04-03 | ARG | A:121 | A:121 | 200.0 | 0.889 | T | -59.1 | -16.9 | 200.0 | 0.889 | 0.0 |
SGN IDS SGN UAP HOH |
6.205 3.607 3.118 9.849 9.067 |
NH1 NH1 N NH1 NH1 |
O3 O6A O3S C1 O |
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1bfc | 1 | P09038 | 98.64 | 2e-105 |
X-RAY |
1996-04-03 | ARG | A:121 | A:121 | 192.0 | 0.853 | T | -74.5 | -27.9 | 192.0 | 0.853 | 0.0 |
IDS SGN IDS SGN UAP HOH |
8.421 4.820 3.086 3.103 9.646 9.085 |
NH2 NH2 NH1 N NH1 N |
O4 O3 O6A O3S C1 O |
||
1bfg | 1 | P09038 | 98.63 | 1e-104 |
X-RAY |
1994-01-31 | ARG | A:120 | A:120 | 163.0 | 0.724 | T | -69.1 | -3.8 | 163.0 | 0.724 | 0.0 |
HOH |
2.601 |
CD |
O |
||
1cvs | 1 | P09038 | 98.48 | 2e-94 |
X-RAY |
2000-01-28 | ARG | A:106 | A:120 | 185.0 | 0.822 | T | -60.5 | -17.4 | 185.0 | 0.822 | 0.0 |
SO4 SO4 |
2.743 6.952 |
N NH2 |
O3 O4 |
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ARG | B:106 | B:120 | 183.0 | 0.813 | T | -61.1 | -16.5 | 183.0 | 0.813 | 0.0 |
SO4 SO4 |
6.428 2.678 |
NH2 N |
O3 O2 |
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1ev2 | 1 | P09038 | 98.48 | 2e-94 |
X-RAY |
2000-05-31 | ARG | A:106 | A:120 | 65.0 | NA | T | -57.2 | -18.3 | 65.0 | NA | NA |
SO4 HOH |
3.089 6.765 |
N N |
O4 O |
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ARG | B:106 | B:120 | 64.0 | NA | T | -57.1 | -18.4 | 64.0 | NA | NA |
SO4 |
2.887 |
N |
O2 |
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ARG | C:106 | C:120 | 67.0 | NA | T | -55.3 | -20.4 | 53.0 | NA | NA |
G:P21802:NA |
SO4 |
2.909 |
N |
O4 |
||||||||
ARG | D:106 | D:120 | 68.0 | NA | T | -56.5 | -19.5 | 54.0 | NA | NA |
H:P21802:NA |
SO4 HOH |
2.990 6.792 |
N N |
O4 O |
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1fq9 | 1 | P09038 | 98.48 | 2e-94 |
X-RAY |
2000-09-27 | ARG | A:106 | A:120 | 180.0 | 0.8 | T | -75.8 | 13.2 | 180.0 | 0.8 | 0.0 |
IDU SGN IDS SGN IDS SGN |
9.576 4.738 2.791 2.896 2.664 7.142 |
NH2 NH2 CD NH1 NH1 NH1 |
O6 O4 O3S O4 O3 C1 |
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ARG | B:106 | B:120 | 202.0 | 0.898 | T | -72.1 | 6.9 | 202.0 | 0.898 | 0.0 |
SGN IDS SGN IDS SGN |
3.834 2.791 3.075 3.525 7.356 |
NE NH2 NH1 CD NH1 |
O5S O6B O4 O3 O3S |
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1bff | 1 | P09038 | 100.0 | 7e-94 |
X-RAY |
1997-06-16 | ARG | A:103 | A:128 | 163.0 | 0.724 | T | -59.4 | -13.4 | 163.0 | 0.724 | 0.0 |
PO4 HOH |
2.301 2.782 |
NE CD |
O1 O |
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2bfh | 1 | P09038 | 100.0 | 4e-93 |
X-RAY |
1994-01-31 | ARG | A:102 | A:120 | 171.0 | 0.76 | T | -71.0 | 1.9 | 171.0 | 0.76 | 0.0 |
HOH |
2.780 |
CD |
O |
||
2m49 | 1 | P09038 | 98.41 | 3e-89 |
NMR |
2013-12-18 | ARG | A:102 | A:120 | 184.0 | 0.818 | T | -62.0 | -15.2 | 77.0 | 0.342 | 0.476 |
B:P04271:0.476 |
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ARG | D:102 | C:120 | 187.0 | 0.831 | T | -62.6 | -15.7 | 77.0 | 0.342 | 0.489 |
C:P04271:0.489 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p09038-f1 | 1 | P09038 | 100.0 | 0.0 | ARG | A:262 | A:262 | 197.0 | 0.876 | T | -59.6 | -12.7 |