Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr4 | 128814675 | . | G | A | CCDS3735.1:NM_014264.4:c.2330cGt>cAt_NP_055079.3:p.777R>H | Homo sapiens polo like kinase 4 (PLK4), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4n7v | 1 | O00444 | 100.0 | 2e-164 |
X-RAY |
2014-07-02 | ARG | A:198 | A:777 | 136.0 | 0.604 | H | -58.7 | -44.7 | 97.0 | 0.431 | 0.173 |
B:O00444:0.173 |
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ARG | B:198 | B:777 | 132.0 | 0.587 | H | -69.9 | -38.3 | 93.0 | 0.413 | 0.174 |
A:O00444:0.173 |
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4n7z | 1 | O00444 | 100.0 | 2e-164 |
X-RAY |
2014-07-02 | ARG | A:198 | A:777 | 165.0 | 0.733 | H | -54.8 | -45.0 | 165.0 | 0.733 | 0.0 |
HOH |
3.477 |
NH2 |
O |
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4n9j | 1 | O00444 | 100.0 | 5e-163 |
X-RAY |
2014-07-02 | ARG | A:197 | A:777 | 153.0 | 0.68 | H | -63.1 | -44.2 | 153.0 | 0.68 | 0.0 |
HOH |
3.108 |
CB |
O |
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ARG | B:197 | B:777 | 142.0 | 0.631 | H | -62.6 | -43.2 | 142.0 | 0.631 | 0.0 |
HOH |
9.849 |
O |
O |
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6n45 | 1 | O00444,Q9Y4B6 | 97.4 | 2e-160 |
X-RAY |
2019-09-04 | ARG | A:201 | A:777 | 53.0 | NA | H | -57.6 | -43.6 | 53.0 | NA | NA | ||||||
ARG | B:201 | B:777 | 53.0 | NA | H | -47.6 | -42.6 | 53.0 | NA | NA | |||||||||||||
6n46 | 1 | O00444 | 98.25 | 1e-159 |
X-RAY |
2019-09-04 | ARG | A:218 | A:192 | 139.0 | 0.618 | H | -59.1 | -43.6 | 107.0 | 0.476 | 0.142 |
B:O00444:0.142 |
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ARG | B:218 | B:192 | 156.0 | 0.693 | H | -57.8 | -43.6 | 136.0 | 0.604 | 0.089 |
A:O00444:0.089 |
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ARG | C:218 | C:192 | 141.0 | 0.627 | H | -58.9 | -42.5 | NA | NA | NA | |||||||||||||
ARG | D:218 | D:192 | 137.0 | 0.609 | H | -58.7 | -43.8 | NA | NA | NA | |||||||||||||
ARG | E:218 | E:192 | 139.0 | 0.618 | H | -58.6 | -42.5 | NA | NA | NA | |||||||||||||
ARG | F:218 | F:192 | 160.0 | 0.711 | H | -57.5 | -43.9 | NA | NA | NA | |||||||||||||
ARG | G:218 | G:192 | 137.0 | 0.609 | H | -58.6 | -43.2 | NA | NA | NA | |||||||||||||
ARG | H:218 | H:192 | 160.0 | 0.711 | H | -58.5 | -42.0 | NA | NA | NA | |||||||||||||
6w38 | 2 | O00444 | 100.0 | 1e-158 |
X-RAY |
2020-05-06 | ARG | B:193 | B:777 | 159.0 | 0.707 | H | -55.1 | -43.7 | 159.0 | 0.707 | 0.0 | ||||||
6w3i | 2 | O00444 | 100.0 | 1e-158 |
X-RAY |
2020-05-06 | ARG | B:193 | B:777 | 191.0 | 0.849 | H | -56.9 | -45.7 | 191.0 | 0.849 | 0.0 | ||||||
6w3j | 2 | O00444 | 100.0 | 1e-158 |
X-RAY |
2020-05-06 | ARG | B:193 | B:777 | 158.0 | 0.702 | H | -55.7 | -44.6 | 158.0 | 0.702 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-o00444-f1 | 1 | O00444 | 100.0 | 0.0 | ARG | A:777 | A:777 | 142.0 | 0.631 | H | -59.8 | -41.9 |