Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 155527964 . C A CCDS47153.1:NM_000509.4:c.1022tGg>tTg_NP_000500.2:p.341W>L Homo sapiens fibrinogen gamma chain (FGG), transcript variant gamma-A, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3ghg 3 P02679 100.0 0.0 X-RAY
 2009-05-19 TRP C:315 C:315 102.0 0.4 T -48.1 -33.4 102.0 0.4 0.0 CA
 9.130
 O
 CA
TRP F:315 F:315 126.0 0.494 S -61.3 -40.7 126.0 0.494 0.0 CA
 9.158
 O
 CA
TRP I:315 I:315 117.0 0.459 T -60.7 -35.0 NA NA NA
TRP L:315 L:315 107.0 0.42 S -61.2 -36.6 NA NA NA
1n86 3 6650830 100.0 0.0 X-RAY
 2003-01-07 TRP C:228 C:315 135.0 0.529 T -40.8 -36.8 135.0 0.529 0.0 CA
 8.895
 O
 CA
TRP F:228 F:315 135.0 0.529 T -38.5 -39.0 135.0 0.529 0.0 CA
 9.026
 O
 CA
2hlo 3 Q53Y18 100.0 0.0 X-RAY
 2007-07-17 TRP C:228 C:315 125.0 0.49 T -51.7 -28.3 125.0 0.49 0.0 CA
HOH
 9.222
8.974
 O
O
 CA
O
TRP F:228 F:315 132.0 0.518 T -58.8 -35.6 NA NA NA
2q9i 3 Q53Y18 100.0 0.0 X-RAY
 2007-12-11 TRP C:228 C:315 130.0 0.51 T -57.7 -36.9 130.0 0.51 0.0 CA
 8.918
 O
 CA
TRP F:228 F:315 133.0 0.522 T -54.6 -37.2 NA NA NA
2z4e 3 Q53Y18 100.0 0.0 X-RAY
 2007-10-23 TRP C:228 C:315 126.0 0.494 T -44.7 -41.4 126.0 0.494 0.0 CA
 8.806
 O
 CA
TRP F:228 F:315 138.0 0.541 T -58.3 -32.2 138.0 0.541 0.0 CA
 8.812
 O
 CA
2h43 3 P02679 100.0 0.0 X-RAY
 2006-12-05 TRP C:227 C:315 100.0 0.392 T -43.2 -25.9 100.0 0.392 0.0 CA
 9.463
 O
 CA
TRP F:227 F:315 103.0 0.404 T -40.6 -28.2 NA NA NA
2hod 3 Q53Y18 100.0 0.0 X-RAY
 2007-05-29 TRP C:227 C:315 127.0 0.498 T -68.0 -30.3 127.0 0.498 0.0 CA
 9.927
 O
 CA
TRP F:227 F:315 99.0 0.388 T -44.4 -26.8 NA NA NA
TRP I:227 I:315 124.0 0.486 T -68.8 -29.5 NA NA NA
TRP L:227 L:315 98.0 0.384 T -44.2 -29.2 NA NA NA
2hpc 3 Q53Y18 100.0 0.0 X-RAY
 2007-05-29 TRP C:227 C:315 124.0 0.486 T -62.7 -22.4 124.0 0.486 0.0 CA
 9.734
 O
 CA
TRP F:227 F:315 101.0 0.396 T -37.6 -33.8 NA NA NA
TRP I:227 I:315 121.0 0.475 T -62.2 -22.2 NA NA NA
TRP L:227 L:315 108.0 0.424 T -32.9 -33.3 NA NA NA
1fza 3 P02679 100.0 0.0 X-RAY
 1997-12-03 TRP C:228 C:315 120.0 0.471 S -82.8 -34.9 120.0 0.471 0.0 CA
 9.571
 O
 CA
TRP F:228 F:315 121.0 0.475 S -82.9 -34.9 121.0 0.475 0.0 CA
 9.572
 O
 CA
1fzb 3 P02679 100.0 0.0 X-RAY
 1997-12-03 TRP C:228 C:315 112.0 0.439 T -52.6 -32.5 112.0 0.439 0.0 CA
 9.108
 O
 CA
TRP F:228 F:315 108.0 0.424 T -55.6 -28.9 108.0 0.424 0.0 CA
 9.289
 O
 CA
1fzc 3 P02679 100.0 0.0 X-RAY
 1998-10-14 TRP C:228 C:315 100.0 0.392 T -56.9 -29.3 100.0 0.392 0.0 CA
HOH
 8.888
3.063
 O
N
 CA
O
TRP F:228 F:315 100.0 0.392 T -54.2 -34.0 100.0 0.392 0.0 CA
HOH
 8.585
3.184
 O
N
 CA
O
1fze 3 P02679 100.0 0.0 X-RAY
 1999-06-08 TRP C:228 C:315 134.0 0.525 T -60.7 -33.4 134.0 0.525 0.0 CA
 8.697
 O
 CA
TRP F:228 F:315 130.0 0.51 T -59.2 -34.5 130.0 0.51 0.0 CA
 8.909
 O
 CA
1fzf 3 P02679 100.0 0.0 X-RAY
 1999-06-08 TRP C:228 C:315 133.0 0.522 T -56.9 -37.6 133.0 0.522 0.0 CA
 8.932
 O
 CA
TRP F:228 F:315 133.0 0.522 T -56.8 -39.1 133.0 0.522 0.0 CA
 8.961
 O
 CA
1fzg 3 P02679 100.0 0.0 X-RAY
 1999-06-08 TRP C:228 C:315 119.0 0.467 T -56.7 -42.3 119.0 0.467 0.0 CA
HOH
 8.629
9.102
 O
N
 CA
O
TRP F:228 F:315 129.0 0.506 T -56.7 -37.3 129.0 0.506 0.0 CA
HOH
 8.473
5.764
 O
N
 CA
O
2xnx 3 P02679 100.0 0.0 X-RAY
 2011-04-13 TRP C:228 C:315 137.0 0.537 T -74.7 -14.2 137.0 0.537 0.0
TRP F:228 F:315 125.0 0.49 S -45.4 -26.7 125.0 0.49 0.0
TRP I:228 I:315 129.0 0.506 T -43.1 -44.3 129.0 0.506 0.0
TRP L:228 L:315 128.0 0.502 T -57.8 -24.5 128.0 0.502 0.0
2xny 3 P02679 100.0 0.0 X-RAY
 2011-04-13 TRP C:228 C:315 121.0 0.475 T -55.5 -37.7 121.0 0.475 0.0
TRP F:228 F:315 122.0 0.478 T -55.5 -37.7 NA NA NA
3e1i 3 P02679 100.0 0.0 X-RAY
 2009-01-13 TRP C:228 C:315 122.0 0.478 T -55.5 -37.7 122.0 0.478 0.0 CA
HOH
 8.666
3.163
 O
N
 CA
O
TRP F:228 F:315 135.0 0.529 T -57.3 -35.3 NA NA NA
3h32 3 P02679 100.0 0.0 X-RAY
 2009-07-28 TRP C:221 C:315 116.0 0.455 T -35.8 -36.7 116.0 0.455 0.0 CA
 9.359
 O
 CA
TRP F:221 F:315 122.0 0.478 T -38.0 -20.5 122.0 0.478 0.0 CA
 9.862
 O
 CA
1lt9 3 P02679 100.0 0.0 X-RAY
 2002-11-06 TRP C:220 C:315 126.0 0.494 T -56.0 -41.3 126.0 0.494 0.0 CA
HOH
 8.846
2.893
 O
CD1
 CA
O
TRP F:220 F:315 100.0 0.392 T -47.3 -32.6 NA NA NA
1ltj 3 P02679 100.0 0.0 X-RAY
 2002-11-06 TRP C:220 C:315 121.0 0.475 T -54.9 -41.9 121.0 0.475 0.0 CA
HOH
 8.758
5.353
 O
N
 CA
O
TRP F:220 F:315 118.0 0.463 T -48.7 -35.2 NA NA NA
1re3 3 P02679 100.0 0.0 X-RAY
 2004-05-25 TRP C:220 C:315 109.0 0.427 T -48.2 -36.7 109.0 0.427 0.0 CA
HOH
 8.632
3.009
 O
N
 CA
O
TRP F:220 F:315 117.0 0.459 T -53.8 -31.1 NA NA NA
1re4 3 P02679 100.0 0.0 X-RAY
 2004-05-25 TRP C:220 C:315 132.0 0.518 T -51.3 -38.2 132.0 0.518 0.0 CA
HOH
 8.797
3.979
 O
CZ3
 CA
O
TRP F:220 F:315 104.0 0.408 T -41.9 -32.5 NA NA NA
2ffd 3 P02679 100.0 0.0 X-RAY
 2006-07-04 TRP C:220 C:315 117.0 0.459 T -51.6 -37.3 117.0 0.459 0.0 CA
HOH
 8.619
2.929
 O
NE1
 CA
O
TRP F:220 F:315 118.0 0.463 T -50.6 -38.6 NA NA NA
1rf0 3 P02679 99.68 0.0 X-RAY
 2004-03-16 TRP C:220 C:315 121.0 0.475 T -55.8 -41.5 121.0 0.475 0.0 CA
HOH
 8.887
3.927
 O
CE3
 CA
O
TRP F:220 F:315 120.0 0.471 T -46.0 -35.6 NA NA NA
1rf1 3 P02679 99.68 0.0 X-RAY
 2004-03-16 TRP C:220 C:315 129.0 0.506 T -56.0 -39.3 129.0 0.506 0.0 CA
HOH
 9.008
5.286
 O
NE1
 CA
O
TRP F:220 F:315 121.0 0.475 T -51.9 -33.1 NA NA NA
3hus 3 P02679 99.68 0.0 X-RAY
 2009-08-18 TRP C:220 C:315 125.0 0.49 S -67.6 -30.9 125.0 0.49 0.0 CA
HOH
 9.906
9.809
 O
CD1
 CA
O
TRP F:220 F:315 122.0 0.478 S -68.4 -33.5 NA NA NA
2oyh 3 P02679 99.36 0.0 X-RAY
 2007-05-15 TRP C:220 C:315 124.0 0.486 T -49.5 -38.6 124.0 0.486 0.0 CA
HOH
 8.939
5.343
 O
N
 CA
O
TRP F:220 F:315 117.0 0.459 T -53.8 -33.9 NA NA NA
2oyi 3 P02679 99.36 0.0 X-RAY
 2007-05-15 TRP C:220 C:315 121.0 0.475 T -53.5 -37.8 121.0 0.475 0.0 CA
HOH
 8.893
6.511
 O
CZ2
 CA
O
TRP F:220 F:315 119.0 0.467 T -55.2 -36.0 NA NA NA
3bvh 3 P02679 99.66 0.0 X-RAY
 2008-09-02 TRP C:214 C:315 120.0 0.471 T -58.6 -31.2 120.0 0.471 0.0 CA
HOH
 8.678
2.724
 O
O
 CA
O
TRP F:214 F:315 131.0 0.514 T -50.0 -47.8 NA NA NA
1fib 1 P02679 100.0 0.0 X-RAY
 1997-04-01 TRP A:173 A:315 101.0 0.396 T -57.6 -31.6 101.0 0.396 0.0 CA
HOH
 8.839
2.836
 O
NE1
 CA
O
1fic 1 P02679 100.0 0.0 X-RAY
 1997-04-01 TRP A:173 A:315 101.0 0.396 T -61.4 -36.0 101.0 0.396 0.0 CA
HOH
 8.642
2.620
 O
N
 CA
O
TRP B:173 B:315 107.0 0.42 T -49.5 -31.7 64.0 0.251 0.169 A:P02679:0.169
 CA
HOH
 8.617
4.512
 O
CH2
 CA
O
1fid 1 P02679 100.0 0.0 X-RAY
 1997-04-01 TRP A:173 A:315 108.0 0.424 T -52.2 -32.2 108.0 0.424 0.0 CA
HOH
 8.694
2.792
 O
N
 CA
O
2fib 1 P02679 100.0 0.0 X-RAY
 1997-10-15 TRP A:173 A:315 92.0 0.361 T -53.2 -21.0 92.0 0.361 0.0 CA
HOH
 8.875
2.826
 O
CD1
 CA
O
3fib 1 P02679 100.0 0.0 X-RAY
 1997-09-17 TRP A:172 A:315 100.0 0.392 T -58.0 -31.8 100.0 0.392 0.0 CA
HOH
 8.835
2.798
 O
NE1
 CA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02679-f1 1 P02679 99.77 0.0 TRP A:341 A:341 114.0 0.447 T -54.6 -30.7