Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 26407810 . A C CCDS3436.1:NM_203283.2:c.67Aat>Cat_NP_976028.1:p.23N>H Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6py8 4 Q06330 100.0 0.0 X-RAY
 2019-08-14 ASN G:16 C:24 77.0 0.481 H -62.1 -40.4 NA NA NA
ASN H:16 E:24 79.0 0.494 H -63.1 -39.7 79.0 0.494 0.0
2f8x 3 Q06330 99.07 0.0 X-RAY
 2006-04-04 ASN C:17 C:24 87.0 0.544 H -60.2 -44.6 87.0 0.544 0.0
3v79 2 Q06330 99.07 0.0 X-RAY
 2012-02-15 ASN B:17 C:24 89.0 0.556 H -57.0 -54.2 89.0 0.556 0.0
3nbn 1 Q06330 98.84 0.0 X-RAY
 2010-11-03 ASN A:17 A:24 75.0 0.469 T -95.9 39.1 75.0 0.469 0.0
ASN D:17 D:24 76.0 0.475 T -96.2 43.2 76.0 0.475 0.0
6wqu 3 P31266 99.29 0.0 X-RAY
 2021-03-31 ASN C:13 C:64 99.0 0.619 H -61.0 -48.6 99.0 0.619 0.0 HOH
 9.560
 N
 O
3iag 3 P31266 99.29 0.0 X-RAY
 2009-11-10 ASN C:12 C:64 77.0 0.481 H -62.6 -46.0 77.0 0.481 0.0 EDO
HOH
 8.002
4.566
 OD1
CB
 O1
O
5eg6 2 P31266 99.29 0.0 X-RAY
 2017-04-26 ASN B:12 C:64 76.0 0.475 H -65.8 -44.3 76.0 0.475 0.0 EDO
BU1
HOH
 8.265
9.740
3.134
 ND2
O
ND2
 O2
C3
O
6dks 3 P31266 99.29 0.0 X-RAY
 2019-01-02 ASN C:12 C:64 106.0 0.662 H -65.2 -46.2 106.0 0.662 0.0
ASN G:12 G:64 108.0 0.675 H -64.5 -46.8 108.0 0.675 0.0
3brg 3 P31266 99.29 0.0 X-RAY
 2008-04-01 ASN C:17 C:64 71.0 0.444 H -60.7 -43.6 71.0 0.444 0.0 HOH
 4.231
 ND2
 O
4j2x 1 P31266 99.05 0.0 X-RAY
 2013-11-06 ASN A:17 A:64 65.0 0.406 H -57.6 -41.4 65.0 0.406 0.0
ASN C:17 C:64 73.0 0.456 H -72.4 -19.1 NA NA NA
5e24 3 P28159 82.62 0.0 X-RAY
 2016-06-15 LYS E:14 E:112 92.0 0.46 H -62.7 -45.9 NA NA NA
LYS F:14 F:112 128.0 0.64 H -62.4 -46.0 128.0 0.64 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q06330-f1 1 Q06330 100.0 0.0 ASN A:38 A:38 87.0 0.544 H -63.1 -45.5