Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 26407843 . C A CCDS3436.1:NM_203283.2:c.100Ctt>Att_NP_976028.1:p.34L>I Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6py8 4 Q06330 100.0 0.0 X-RAY
 2019-08-14 LEU G:27 C:35 26.0 0.153 E -124.8 144.3 NA NA NA
LEU H:27 E:35 23.0 0.135 E -124.4 144.2 23.0 0.135 0.0
2f8x 3 Q06330 99.07 0.0 X-RAY
 2006-04-04 LEU C:28 C:35 15.0 0.088 175.5 128.8 15.0 0.088 0.0
3v79 2 Q06330 99.07 0.0 X-RAY
 2012-02-15 LEU B:28 C:35 16.0 0.094 E -175.0 151.3 16.0 0.094 0.0
3nbn 1 Q06330 98.84 0.0 X-RAY
 2010-11-03 LEU A:28 A:35 21.0 0.124 E 179.0 76.4 21.0 0.124 0.0
LEU D:28 D:35 20.0 0.118 E 174.5 77.0 20.0 0.118 0.0
6wqu 3 P31266 99.29 0.0 X-RAY
 2021-03-31 LEU C:24 C:75 14.0 0.082 E -111.4 138.0 14.0 0.082 0.0 HOH
 7.091
 CD2
 O
3iag 3 P31266 99.29 0.0 X-RAY
 2009-11-10 LEU C:23 C:75 25.0 0.147 E -111.0 138.0 25.0 0.147 0.0 EDO
HOH
 8.670
6.042
 CD2
CD1
 C1
O
5eg6 2 P31266 99.29 0.0 X-RAY
 2017-04-26 LEU B:23 C:75 18.0 0.106 E -111.0 126.5 18.0 0.106 0.0 EDO
BU1
BU1
HOH
 6.801
7.966
4.043
6.954
 CD2
CD2
CD1
CD2
 C2
C4
C1
O
6dks 3 P31266 99.29 0.0 X-RAY
 2019-01-02 LEU C:23 C:75 14.0 0.082 E -114.4 131.5 14.0 0.082 0.0
LEU G:23 G:75 25.0 0.147 E -112.4 131.8 25.0 0.147 0.0
3brg 3 P31266 99.29 0.0 X-RAY
 2008-04-01 LEU C:28 C:75 20.0 0.118 E -109.4 137.4 20.0 0.118 0.0 EDO
EDO
HOH
 9.980
6.767
4.040
 C
CD1
CD2
 C2
C2
O
4j2x 1 P31266 99.05 0.0 X-RAY
 2013-11-06 LEU A:28 A:75 15.0 0.088 E -111.3 132.6 15.0 0.088 0.0 EDO
 8.191
 CD1
 C1
LEU C:28 C:75 17.0 0.1 E -108.3 141.4 NA NA NA
5e24 3 P28159 82.62 0.0 X-RAY
 2016-06-15 VAL E:25 E:123 8.0 0.052 E -121.7 132.2 NA NA NA
VAL F:25 F:123 5.0 0.032 E -119.2 131.1 5.0 0.032 0.0 EDO
EDO
EDO
EDO
HOH
 3.779
9.954
8.312
6.576
7.757
 CG2
N
CA
CG2
CG1
 O2
O2
O1
O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q06330-f1 1 Q06330 100.0 0.0 LEU A:49 A:49 25.0 0.147 E -115.4 123.5