Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 26417158 . C A CCDS3436.1:NM_203283.2:c.211Caa>Aaa_NP_976028.1:p.71Q>K Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6py8 4 Q06330 100.0 0.0 X-RAY
 2019-08-14 GLN G:64 C:72 64.0 0.356 H -53.1 -52.5 NA NA NA
GLN H:64 E:72 86.0 0.478 H -53.8 -51.5 86.0 0.478 0.0
2f8x 3 Q06330 99.07 0.0 X-RAY
 2006-04-04 GLN C:65 C:72 48.0 0.267 H -60.3 -41.6 48.0 0.267 0.0
3v79 2 Q06330 99.07 0.0 X-RAY
 2012-02-15 GLN B:65 C:72 48.0 0.267 H -63.0 -36.9 48.0 0.267 0.0
3nbn 1 Q06330 98.84 0.0 X-RAY
 2010-11-03 GLN A:65 A:72 61.0 0.339 H -48.6 -37.2 61.0 0.339 0.0
GLN D:65 D:72 62.0 0.344 H -45.2 -42.1 62.0 0.344 0.0
6wqu 3 P31266 99.29 0.0 X-RAY
 2021-03-31 GLN C:61 C:112 29.0 0.161 H -59.3 -49.8 29.0 0.161 0.0 HOH
 4.436
 N
 O
3iag 3 P31266 99.29 0.0 X-RAY
 2009-11-10 GLN C:60 C:112 46.0 0.256 H -64.2 -50.5 46.0 0.256 0.0 EDO
HOH
 6.224
5.015
 OE1
N
 C1
O
5eg6 2 P31266 99.29 0.0 X-RAY
 2017-04-26 GLN B:60 C:112 32.0 0.178 H -62.7 -47.2 32.0 0.178 0.0 EDO
BU1
HOH
 3.345
3.988
2.955
 N
CB
OE1
 O1
O6
O
6dks 3 P31266 99.29 0.0 X-RAY
 2019-01-02 GLN C:60 C:112 52.0 0.289 H -69.6 -48.7 52.0 0.289 0.0
GLN G:60 G:112 61.0 0.339 H -68.2 -47.7 61.0 0.339 0.0
3brg 3 P31266 99.29 0.0 X-RAY
 2008-04-01 GLN C:65 C:112 54.0 0.3 H -62.5 -49.0 54.0 0.3 0.0 EDO
EDO
HOH
 3.424
5.896
3.352
 O
OE1
N
 C2
C1
O
4j2x 1 P31266 99.05 0.0 X-RAY
 2013-11-06 GLN A:65 A:112 53.0 0.294 H -54.2 -53.2 53.0 0.294 0.0 HOH
 6.026
 OE1
 O
GLN C:65 C:112 53.0 0.294 H -57.7 -48.3 NA NA NA
5e24 3 P28159 82.62 0.0 X-RAY
 2016-06-15 GLU E:62 E:160 70.0 0.368 H -64.1 -43.0 NA NA NA
GLU F:62 F:160 67.0 0.353 H -64.1 -43.5 67.0 0.353 0.0 EDO
EDO
EDO
 9.349
7.174
7.704
 N
O
OE1
 C1
O2
O1

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q06330-f1 1 Q06330 100.0 0.0 GLN A:86 A:86 44.0 0.244 H -68.7 -45.6