Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr4 | 26417162 | . | T | A | CCDS3436.1:NM_203283.2:c.215aTg>aAg_NP_976028.1:p.72M>K | Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6py8 | 4 | Q06330 | 100.0 | 0.0 |
X-RAY |
2019-08-14 | MET | G:65 | C:73 | 28.0 | 0.151 | H | -59.7 | -42.4 | NA | NA | NA | ||||||
| MET | H:65 | E:73 | 14.0 | 0.076 | H | -59.4 | -44.3 | 14.0 | 0.076 | 0.0 | |||||||||||||
| 2f8x | 3 | Q06330 | 99.07 | 0.0 |
X-RAY |
2006-04-04 | MET | C:66 | C:73 | 8.0 | 0.043 | H | -63.3 | -44.5 | 8.0 | 0.043 | 0.0 | ||||||
| 3v79 | 2 | Q06330 | 99.07 | 0.0 |
X-RAY |
2012-02-15 | MET | B:66 | C:73 | 12.0 | 0.065 | H | -69.1 | -44.2 | 12.0 | 0.065 | 0.0 | ||||||
| 3nbn | 1 | Q06330 | 98.84 | 0.0 |
X-RAY |
2010-11-03 | MET | A:66 | A:73 | 10.0 | 0.054 | H | -69.3 | -56.3 | 10.0 | 0.054 | 0.0 | ||||||
| MET | D:66 | D:73 | 11.0 | 0.059 | H | -65.3 | -59.7 | 11.0 | 0.059 | 0.0 | |||||||||||||
| 6wqu | 3 | P31266 | 99.29 | 0.0 |
X-RAY |
2021-03-31 | MET | C:62 | C:113 | 5.0 | 0.027 | H | -61.4 | -43.3 | 5.0 | 0.027 | 0.0 |
HOH |
3.458 |
SD |
O |
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| 3iag | 3 | P31266 | 99.29 | 0.0 |
X-RAY |
2009-11-10 | MET | C:61 | C:113 | 6.0 | 0.032 | H | -55.5 | -47.5 | 6.0 | 0.032 | 0.0 |
EDO HOH |
8.672 3.258 |
N SD |
C1 O |
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| 5eg6 | 2 | P31266 | 99.29 | 0.0 |
X-RAY |
2017-04-26 | MET | B:61 | C:113 | 4.0 | 0.022 | H | -62.7 | -39.0 | 4.0 | 0.022 | 0.0 |
EDO BU1 HOH |
5.869 6.512 3.776 |
N N CG |
O1 O6 O |
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| 6dks | 3 | P31266 | 99.29 | 0.0 |
X-RAY |
2019-01-02 | MET | C:61 | C:113 | 9.0 | 0.049 | H | -60.6 | -39.1 | 9.0 | 0.049 | 0.0 | ||||||
| MET | G:61 | G:113 | 9.0 | 0.049 | H | -61.9 | -39.7 | 9.0 | 0.049 | 0.0 | |||||||||||||
| 3brg | 3 | P31266 | 99.29 | 0.0 |
X-RAY |
2008-04-01 | MET | C:66 | C:113 | 5.0 | 0.027 | H | -60.0 | -40.9 | 5.0 | 0.027 | 0.0 |
EDO EDO HOH |
5.241 8.340 3.423 |
N N SD |
C2 C1 O |
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| 4j2x | 1 | P31266 | 99.05 | 0.0 |
X-RAY |
2013-11-06 | MET | A:66 | A:113 | 3.0 | 0.016 | H | -60.2 | -47.3 | 3.0 | 0.016 | 0.0 |
HOH |
9.468 |
CG |
O |
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| MET | C:66 | C:113 | 8.0 | 0.043 | H | -64.0 | -54.8 | NA | NA | NA | |||||||||||||
| 5e24 | 3 | P28159 | 82.62 | 0.0 |
X-RAY |
2016-06-15 | MET | E:63 | E:161 | 3.0 | 0.016 | H | -67.1 | -36.8 | NA | NA | NA | ||||||
| MET | F:63 | F:161 | 2.0 | 0.011 | H | -67.0 | -36.7 | 2.0 | 0.011 | 0.0 |
EDO EDO EDO HOH |
8.595 4.372 6.555 7.128 |
SD O SD O |
C1 O2 O1 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-q06330-f1 | 1 | Q06330 | 100.0 | 0.0 | MET | A:87 | A:87 | 6.0 | 0.032 | H | -63.0 | -41.6 | |