Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 26431638 . C A CCDS3436.1:NM_203283.2:c.1001gCc>gAc_NP_976028.1:p.334A>D Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6py8 4 Q06330 100.0 0.0 X-RAY
 2019-08-14 ALA G:327 C:335 44.0 0.383 S -66.9 131.0 NA NA NA
ALA H:327 E:335 46.0 0.4 S -67.4 131.7 46.0 0.4 0.0
2f8x 3 Q06330 99.07 0.0 X-RAY
 2006-04-04 ALA C:328 C:335 38.0 0.33 S -97.2 178.6 26.0 0.226 0.104 E:Q92585:0.104
 HOH
 4.603
 CB
 O
3v79 2 Q06330 99.07 0.0 X-RAY
 2012-02-15 ALA B:328 C:335 39.0 0.339 S -103.1 152.9 24.0 0.209 0.13 C:Q92585:0.13
3nbn 1 Q06330 98.84 0.0 X-RAY
 2010-11-03 ALA A:328 A:335 33.0 0.287 S -89.6 159.7 18.0 0.157 0.13 C:Q92585:0.13
ALA D:328 D:335 34.0 0.296 S -90.7 160.8 18.0 0.157 0.139 F:Q92585:0.139
6wqu 3 P31266 99.29 0.0 X-RAY
 2021-03-31 ALA C:324 C:375 43.0 0.374 S -65.3 139.7 43.0 0.374 0.0 HOH
 3.647
 CB
 O
3iag 3 P31266 99.29 0.0 X-RAY
 2009-11-10 ALA C:323 C:375 45.0 0.391 S -85.4 132.8 45.0 0.391 0.0 HOH
 3.053
 O
 O
5eg6 2 P31266 99.29 0.0 X-RAY
 2017-04-26 ALA B:323 C:375 41.0 0.357 S -72.8 153.3 41.0 0.357 0.0 HOH
 2.893
 O
 O
6dks 3 P31266 99.29 0.0 X-RAY
 2019-01-02 ALA C:323 C:375 49.0 0.426 S -68.3 146.2 49.0 0.426 0.0
ALA G:323 G:375 48.0 0.417 S -69.1 146.4 48.0 0.417 0.0
3brg 3 P31266 99.29 0.0 X-RAY
 2008-04-01 ALA C:328 C:375 46.0 0.4 S -79.5 145.7 46.0 0.4 0.0 EDO
HOH
 3.477
5.086
 CB
O
 O1
O
4j2x 1 P31266 99.05 0.0 X-RAY
 2013-11-06 ALA A:328 A:375 48.0 0.417 S -63.3 145.3 48.0 0.417 0.0
ALA C:328 C:375 43.0 0.374 S -91.5 156.2 NA NA NA
5e24 3 P28159 82.62 0.0 X-RAY
 2016-06-15 SER E:325 E:423 55.0 0.478 S -113.8 150.7 NA NA NA
SER F:325 F:423 56.0 0.487 S -111.8 150.7 56.0 0.487 0.0 EDO
EDO
EDO
HOH
 9.196
6.119
6.196
4.772
 OG
OG
O
OG
 O1
O1
O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q06330-f1 1 Q06330 100.0 0.0 ALA A:349 A:349 47.0 0.409 S -87.9 138.4