Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 100806745 . C A CCDS3652.1:NM_021970.3:c.191gGa>gTa_NP_068805.1:p.64G>V Homo sapiens late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 (LAMTOR3), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5y39 3 Q9UHA4 100.0 4e-88 X-RAY
 2017-12-06 GLY C:64 C:64 72.0 0.96 S 90.3 13.7 55.0 0.733 0.227 B:Q9Y2Q5:0.227
 HOH
 2.808
 N
 O
GLY H:64 H:64 79.0 1.0 S 97.2 -3.8 NA NA NA
5y3a 3 Q9UHA4 100.0 4e-88 X-RAY
 2017-12-27 GLY C:64 C:64 76.0 1.0 S 89.9 -1.0 58.0 0.773 0.227 B:Q9Y2Q5:0.24
GLY H:64 H:64 78.0 1.0 S 85.7 -2.9 NA NA NA
5yk3 1 Q9UHA4 100.0 4e-88 X-RAY
 2019-01-23 GLY A:64 m:64 77.0 1.0 S 77.9 6.6 22.0 0.293 0.707 B:Q9Y2Q5:0.733
GLY K:64 H:64 72.0 0.96 S 86.1 4.5 NA NA NA
6b9x 3 Q9UHA4 100.0 4e-88 X-RAY
 2017-11-08 GLY C:64 C:64 72.0 0.96 S 83.1 11.1 55.0 0.733 0.227 B:Q9Y2Q5:0.227
 HOH
 2.853
 N
 O
6nzd 3 Q9UHA4 100.0 4e-88 EM
 2019-11-06 GLY C:64 C:64 74.0 0.987 S 83.1 11.1 57.0 0.76 0.227 B:Q9Y2Q5:0.227
6ulg 2 Q9UHA4 100.0 4e-88 EM
 2019-11-20 GLY B:64 A:64 78.0 1.0 S 87.5 -22.6 44.0 0.587 0.413 C:Q9Y2Q5:0.453
6wj2 3 Q9UHA4 100.0 4e-88 EM
 2020-09-02 GLY C:64 C:64 75.0 1.0 S 72.1 0.7 46.0 0.613 0.387 B:Q9Y2Q5:0.387
6wj3 3 Q9UHA4 100.0 4e-88 EM
 2020-09-02 GLY C:64 C:64 63.0 0.84 S 66.4 6.0 38.0 0.507 0.333 B:Q9Y2Q5:0.333
6ehp 1 Q9UHA4 100.0 4e-88 X-RAY
 2017-10-04 GLY A:67 A:64 74.0 0.987 S 80.0 17.6 61.0 0.813 0.174 B:Q9Y2Q5:0.173
 HOH
 2.884
 N
 O
6ehr 1 Q9UHA4 100.0 4e-88 X-RAY
 2017-10-04 GLY A:67 A:64 68.0 0.907 S 80.4 16.1 37.0 0.493 0.414 B:Q9Y2Q5:0.413
6u62 6 Q9UHA4 100.0 1e-87 EM
 2019-10-30 GLY F:64 F:64 79.0 1.0 S 83.8 -46.8 58.0 0.773 0.227 E:Q9Y2Q5:0.28
5x6u 1 Q9UHA4 100.0 3e-87 X-RAY
 2017-12-06 GLY A:67 A:64 74.0 0.987 S 84.7 18.8 60.0 0.8 0.187 B:Q9Y2Q5:0.187
 HOH
 3.428
 N
 O
5x6v 1 Q9UHA4 100.0 3e-87 X-RAY
 2017-12-06 GLY A:67 A:64 73.0 0.973 S 97.1 14.1 37.0 0.493 0.48 B:Q9Y2Q5:0.48
 HOH
 3.513
 N
 O
1sko 1 Q9UHA4 100.0 4e-87 X-RAY
 2004-06-01 GLY A:83 A:65 73.0 0.973 S 93.2 12.5 28.0 0.373 0.6 B:Q9JHS3:0.6
 HOH
 2.633
 N
 O
3cpt 1 Q9UHA4 100.0 4e-87 X-RAY
 2008-07-01 GLY A:83 A:64 67.0 0.893 T 144.9 -21.0 37.0 0.493 0.4 B:Q9JHS3:0.4
 HOH
 3.786
 CA
 O
5yk3 6 Q9UHA4 100.0 2e-86 X-RAY
 2019-01-23 GLY F:64 C:64 72.0 0.96 S 77.9 8.2 NA NA NA
2zl1 1 Q9UHA4 98.37 1e-85 X-RAY
 2008-06-24 GLY A:83 A:64 78.0 1.0 S 101.7 2.0 50.0 0.667 0.333 B:Q9JHS3:0.373
 HOH
 3.260
 N
 O
1vet 1 O88653 97.58 3e-85 X-RAY
 2004-08-03 GLY A:64 A:64 74.0 0.987 S 79.2 10.9 47.0 0.627 0.36 B:Q9JHS3:0.36
 HOH
 2.873
 N
 O
1veu 1 O88653 97.58 3e-85 X-RAY
 2004-08-03 GLY A:64 A:64 69.0 0.92 S 93.3 13.2 41.0 0.547 0.373 B:Q9JHS3:0.373
 HOH
 2.674
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9uha4-f1 1 Q9UHA4 100.0 2e-88 GLY A:64 A:64 69.0 0.92 S 79.5 8.0