Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 102030185 . C A CCDS34037.1:NM_000944.4:c.310Gtc>Ttc_NP_000935.1:p.104V>F Homo sapiens protein phosphatase 3 catalytic subunit alpha (PPP3CA), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1aui 1 Q08209 100.0 0.0 X-RAY
1997-12-03 VAL A:104 A:104 8.0 0.052 H -68.5 -33.7 8.0 0.052 0.0 HOH
3.356
O
O
4orb 1 P63328 97.7 0.0 X-RAY
2015-05-20 VAL A:104 A:104 11.0 0.071 H -73.7 -47.3 11.0 0.071 0.0
4il1 1 P62161,P63100,P63329 97.76 0.0 X-RAY
2013-10-02 VAL A:437 A:437 14.0 0.09 H -78.5 -40.7 14.0 0.09 0.0 HOH
8.459
O
O
VAL B:437 B:437 4.0 0.026 H -76.3 -41.0 NA NA NA
VAL C:437 C:437 6.0 0.039 H -76.9 -41.0 NA NA NA
VAL D:437 D:437 7.0 0.045 H -78.7 -40.5 NA NA NA
4or9 1 P16298 85.63 0.0 X-RAY
2015-05-20 VAL A:133 A:113 22.0 0.142 H -71.4 -49.5 22.0 0.142 0.0 HOH
4.488
O
O
4orc 1 P16298 85.63 0.0 X-RAY
2015-05-20 VAL A:133 A:113 26.0 0.168 H -73.1 -45.3 26.0 0.168 0.0 HOH
7.392
CG2
O
4ora 1 P16298 85.23 0.0 X-RAY
2015-05-20 VAL A:133 A:113 18.0 0.116 H -82.5 -48.7 18.0 0.116 0.0 HOH
7.437
CG2
O
2p6b 2 Q08209 100.0 0.0 X-RAY
2007-06-05 VAL B:107 A:104 24.0 0.155 H -62.8 -39.5 5.0 0.032 0.123 A:None:0.123
HOH
3.708
O
O
VAL D:107 C:104 18.0 0.116 H -78.2 -39.1 18.0 0.116 0.0 HOH
3.643
O
O
1tco 1 P48452 99.73 0.0 X-RAY
1997-02-12 VAL A:87 A:104 11.0 0.071 H -71.8 -40.2 11.0 0.071 0.0 HOH
3.696
CG2
O
1mf8 1 Q08209 100.0 0.0 X-RAY
2002-10-16 VAL A:85 A:104 7.0 0.045 H -90.1 -46.9 7.0 0.045 0.0
1m63 1 Q08209 100.0 0.0 X-RAY
2002-09-25 VAL A:104 A:104 41.0 0.265 H -70.0 -29.2 41.0 0.265 0.0
VAL E:104 E:104 27.0 0.174 H -77.8 -33.6 27.0 0.174 0.0
5sve 1 Q08209 100.0 0.0 X-RAY
2017-01-11 VAL A:104 A:104 5.0 0.032 H -74.8 -39.5 5.0 0.032 0.0 HOH
3.708
O
O
4f0z 1 Q08209 100.0 0.0 X-RAY
2013-03-06 VAL A:106 A:104 30.0 0.194 H -76.9 -38.6 30.0 0.194 0.0 HOH
3.061
HG13
O
6nuc 1 Q08209 100.0 0.0 X-RAY
2019-07-03 VAL A:106 A:104 31.0 0.2 H -75.0 -44.2 31.0 0.2 0.0 HOH
2.931
HG22
O
6nuf 1 Q08209 100.0 0.0 X-RAY
2019-07-03 VAL A:106 A:104 27.0 0.174 H -72.2 -43.0 27.0 0.174 0.0 HOH
2.685
HG22
O
6nuu 1 Q08209 99.46 0.0 X-RAY
2019-07-03 VAL A:106 A:104 32.0 0.206 H -68.8 -41.1 32.0 0.206 0.0 HOH
3.078
HG22
O
3ll8 2 Q08209 100.0 0.0 X-RAY
2011-01-12 VAL B:91 A:104 29.0 0.187 H -73.8 -41.2 9.0 0.058 0.129 A:P24588:0.129
HOH
2.927
O
O
VAL D:91 C:104 9.0 0.058 H -68.0 -43.1 NA NA NA
5c1v 1 Q08209 99.42 0.0 X-RAY
2016-02-03 VAL A:103 A:104 34.0 0.219 H -65.1 -37.5 34.0 0.219 0.0
VAL B:103 B:104 58.0 0.374 H -84.5 -44.8 NA NA NA
6uuq 1 Q08209 100.0 0.0 X-RAY
2020-09-09 VAL A:81 A:104 43.0 0.277 H -70.0 -41.2 43.0 0.277 0.0 HOH
2.811
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q08209-f1 1 Q08209 100.0 0.0 VAL A:104 A:104 27.0 0.174 H -80.4 -42.3
af-p16298-f1 1 P16298 85.63 0.0 VAL A:113 A:113 39.0 0.252 H -83.6 -42.0
af-p48454-f1 1 P48454 81.84 0.0 VAL A:100 A:100 37.0 0.239 H -82.8 -41.0