Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 123377467 . C A CCDS3726.1:NM_000586.3:c.129atG>atT_NP_000577.2:p.43M>I Homo sapiens interleukin 2 (IL2), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6ye3 3 P60568 100.0 1e-95 X-RAY
2020-12-30 MET C:24 C:18 78.0 0.422 H -61.3 -40.0 78.0 0.422 0.0 HOH
7.850
O
O
MET F:24 F:18 115.0 0.622 H -64.7 -35.6 NA NA NA
MET I:24 I:18 96.0 0.519 H -60.0 -45.7 NA NA NA
1m47 1 P60568 100.0 2e-95 X-RAY
2002-07-31 MET A:23 A:23 65.0 0.351 H -63.1 -37.4 65.0 0.351 0.0 HOH
3.155
CE
O
1m48 1 P60568 100.0 2e-95 X-RAY
2002-07-31 MET A:23 A:23 133.0 0.719 H -66.6 -41.8 133.0 0.719 0.0 HOH
3.093
CG
O
MET B:23 B:23 100.0 0.541 H -65.5 -36.7 NA NA NA
1m49 1 P60568 100.0 2e-95 X-RAY
2002-07-31 MET A:23 A:23 138.0 0.746 H -70.7 -40.4 138.0 0.746 0.0 HOH
4.640
N
O
MET B:23 B:23 98.0 0.53 H -66.8 -38.4 NA NA NA
1m4c 1 P60568 100.0 2e-95 X-RAY
2002-07-31 MET A:23 A:23 106.0 0.573 H -68.1 -35.6 106.0 0.573 0.0
MET B:23 B:23 105.0 0.568 H -67.4 -36.6 NA NA NA
1pw6 1 P60568 100.0 2e-95 X-RAY
2004-01-13 MET A:23 A:23 118.0 0.638 H -60.5 -48.5 118.0 0.638 0.0
MET B:23 B:23 84.0 0.454 H -56.8 -50.3 NA NA NA
1z92 1 P60568 100.0 2e-95 X-RAY
2005-06-07 MET A:23 A:23 114.0 0.616 H -58.1 -41.7 114.0 0.616 0.0
2b5i 1 P60568 100.0 2e-95 X-RAY
2005-11-29 MET A:23 A:23 86.0 0.465 H -55.9 -51.4 55.0 0.297 0.168 B:P14784:0.168
HOH
5.655
SD
O
5utz 3 P60568 100.0 2e-95 X-RAY
2018-07-11 MET C:23 D:23 96.0 0.519 H -62.7 -43.8 5.0 0.027 0.492 A:Q6GMX6:0.492
HOH
3.574
N
O
MET F:23 A:23 81.0 0.438 H -62.9 -43.2 NA NA NA
MET I:23 E:23 81.0 0.438 H -62.9 -43.4 NA NA NA
MET L:23 I:23 85.0 0.459 H -62.9 -43.5 NA NA NA
7dr4 3 P60568 100.0 2e-95 X-RAY
2021-04-14 MET I:23 G:23 70.0 0.378 H -63.8 -47.2 NA NA NA
MET J:23 I:23 86.0 0.465 H -64.9 -49.7 NA NA NA
MET K:23 J:23 72.0 0.389 H -65.2 -41.9 NA NA NA
MET L:23 K:23 64.0 0.346 H -66.3 -45.8 64.0 0.346 0.0
1py2 1 P60568 100.0 7e-95 X-RAY
2004-01-13 MET A:23 A:23 103.0 0.557 H -68.6 -35.4 103.0 0.557 0.0
MET B:23 B:23 123.0 0.665 H -60.0 -47.3 NA NA NA
MET C:23 C:23 115.0 0.622 H -66.0 -42.0 NA NA NA
MET D:23 D:23 106.0 0.573 H -71.2 -36.0 NA NA NA
2erj 4 P60568 99.25 1e-94 X-RAY
2006-02-21 MET D:23 D:23 95.0 0.514 H -74.7 -35.4 59.0 0.319 0.195 B:P14784:0.195
MET H:23 H:23 104.0 0.562 H -64.4 -37.3 NA NA NA
3ink 1 P60568 99.25 1e-94 X-RAY
1993-10-31 MET A:23 C:23 40.0 0.216 H -71.5 -25.8 40.0 0.216 0.0
MET B:23 D:23 32.0 0.173 H -68.1 -30.3 32.0 0.173 0.0
1qvn 1 P60568 99.24 3e-94 X-RAY
2005-04-05 MET A:23 A:23 108.0 0.584 H -66.7 -48.1 108.0 0.584 0.0 ZN
5.574
CE
ZN
MET B:23 B:23 112.0 0.605 H -62.6 -45.5 NA NA NA
MET C:23 C:23 112.0 0.605 H -69.9 -43.2 112.0 0.605 0.0
MET D:23 D:23 114.0 0.616 H -71.2 -35.4 NA NA NA
1m4b 1 P60568 99.25 4e-94 X-RAY
2002-07-31 MET A:23 A:23 110.0 0.595 H -59.0 -38.9 110.0 0.595 0.0 HOH
5.101
CE
O
1m4a 1 P60568 99.25 6e-94 X-RAY
2002-07-31 MET A:23 A:23 72.0 0.389 H -69.2 -32.6 72.0 0.389 0.0 MPE
HOH
9.834
3.536
O
CE
S1
O
1nbp 1 P60568 99.25 6e-94 X-RAY
2002-12-18 MET A:23 A:23 83.0 0.449 H -58.3 -43.9 83.0 0.449 0.0 MHC
HOH
4.465
3.403
O
CA
C15
O
5lqb 1 P60568 99.24 9e-94 X-RAY
2016-12-14 MET A:22 A:43 35.0 0.189 H -61.7 -47.2 35.0 0.189 0.0 HOH
2.931
O
O
7m2g 1 P60568 98.5 3e-93 X-RAY
2021-08-04 MET A:23 A:43 67.0 0.362 H -57.2 -44.0 67.0 0.362 0.0 HOH
2.681
O
O
4nej 1 Q6QWN0 99.23 8e-92 X-RAY
2014-11-19 MET A:20 A:23 111.0 0.6 H -59.2 -40.0 111.0 0.6 0.0 HOH
2.773
O
O
4nem 1 Q6QWN0 99.23 8e-92 X-RAY
2014-11-19 MET A:20 A:23 96.0 0.519 H -62.8 -39.2 96.0 0.519 0.0 HOH
3.832
O
O
5m5e 3 ? 90.6 8e-71 X-RAY
2017-05-03 MET C:42 D:23 105.0 0.568 H -69.3 -40.2 68.0 0.368 0.2 A:P14784:0.2
HOH
3.190
CE
O
3qaz 1 P60568 94.07 9e-71 X-RAY
2012-04-11 MET A:26 A:23 67.0 0.362 H -62.6 -38.3 35.0 0.189 0.173 B:P14784:0.173
MET D:26 D:23 73.0 0.395 H -54.7 -35.6 NA NA NA
MET G:26 G:23 64.0 0.346 H -46.8 -58.4 NA NA NA
MET J:26 J:23 72.0 0.389 H -60.7 -30.3 NA NA NA
MET M:26 M:23 65.0 0.351 H -55.2 -59.8 NA NA NA
MET P:26 P:23 66.0 0.357 H -66.0 -43.0 NA NA NA
MET S:26 S:23 70.0 0.378 H -68.1 -35.8 NA NA NA
MET V:26 V:23 70.0 0.378 H -70.9 -28.1 NA NA NA
MET Y:26 Y:23 72.0 0.389 H -71.2 -28.8 NA NA NA
MET BA:26 b:23 69.0 0.373 H -54.1 -33.8 NA NA NA
MET EA:26 e:23 74.0 0.4 H -62.9 -37.0 NA NA NA
MET HA:26 h:23 67.0 0.362 H -52.4 -43.4 NA NA NA
3qb1 1 P60568 94.07 9e-71 X-RAY
2012-04-11 MET A:26 A:23 70.0 0.378 H -63.0 -43.1 70.0 0.378 0.0
MET B:26 B:23 67.0 0.362 H -66.8 -42.1 NA NA NA
MET C:26 C:23 70.0 0.378 H -68.8 -41.2 NA NA NA
MET D:26 D:23 69.0 0.373 H -67.6 -39.9 NA NA NA
MET E:26 E:23 70.0 0.378 H -69.4 -40.8 NA NA NA
MET F:26 F:23 69.0 0.373 H -64.6 -41.4 NA NA NA
MET G:26 G:23 70.0 0.378 H -62.4 -42.3 NA NA NA
MET H:26 H:23 68.0 0.368 H -65.3 -40.3 NA NA NA
6vwu 1 Q6QWN0,P60568,P01589 82.95 2e-23 X-RAY
2020-04-29 MET A:81 A:81 51.0 0.276 H -65.3 -43.6 51.0 0.276 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p60568-f1 1 P60568 100.0 6e-111 MET A:43 A:43 91.0 0.492 H -62.1 -44.0