Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 140375452 . A C CCDS3747.1:NM_031296.1:c.103Aag>Cag_NP_112586.1:p.35K>Q Homo sapiens RAB33B, member RAS oncogene family (RAB33B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zay 1 Q9H082 99.48 2e-144 X-RAY
 2020-09-30 LYS A:9 A:35 18.0 0.09 E -83.3 120.8 2.0 0.01 0.08 B:Q8C0J2:0.08
 HOH
 3.504
 CB
 O
LYS C:9 B:35 17.0 0.085 E -82.9 119.9 1.0 0.005 0.08 D:Q8C0J2:0.08
 PEG
HOH
 7.432
3.836
 O
CB
 C1
O
6y09 1 Q9H082 98.95 2e-143 X-RAY
 2020-09-30 LYS A:9 A:35 18.0 0.09 E -86.7 119.2 3.0 0.015 0.075 B:Q8C0J2:0.075
 HOH
 3.599
 CB
 O
LYS C:9 B:35 18.0 0.09 E -82.8 117.8 1.0 0.005 0.085 D:Q8C0J2:0.085
 PEG
HOH
 7.547
3.529
 O
CD
 O2
O
2g77 2 O35963 98.38 1e-137 X-RAY
 2006-07-25 LYS B:31 B:35 38.0 0.19 E -90.3 116.1 27.0 0.135 0.055 A:Q08484:0.055
 HOH
 3.096
 NZ
 O
1z06 1 O35963 96.13 8e-130 X-RAY
 2005-07-26 LYS A:22 A:35 11.0 0.055 E -86.7 118.9 11.0 0.055 0.0 HOH
 2.962
 NZ
 O
6sur 1 O35963 98.27 7e-129 X-RAY
 2020-08-05 LYS A:6 A:35 15.0 0.075 E -90.4 121.3 8.0 0.04 0.035 G:Q8C0J2:0.035
LYS B:6 B:35 14.0 0.07 E -89.1 121.4 6.0 0.03 0.04 H:Q8C0J2:0.04
LYS C:6 C:35 13.0 0.065 E -89.6 120.7 NA NA NA
LYS D:6 D:35 11.0 0.055 E -90.5 122.0 NA NA NA
LYS E:6 E:35 15.0 0.075 E -88.7 120.7 NA NA NA
LYS F:6 F:35 15.0 0.075 E -89.2 121.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h082-f1 1 Q9H082 100.0 2e-176 LYS A:35 A:35 18.0 0.09 E -80.7 112.8