Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 140375493 . C A CCDS3747.1:NM_031296.1:c.144tgC>tgA_NP_112586.1:p.48C>* Homo sapiens RAB33B, member RAS oncogene family (RAB33B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zay 1 Q9H082 99.48 2e-144 X-RAY
 2020-09-30 CYS A:22 A:48 17.0 0.126 H -61.7 -44.3 17.0 0.126 0.0 PEG
MG
GDP
HOH
 8.267
5.972
2.891
4.073
 SG
N
N
SG
 O4
MG
O1A
O
CYS C:22 B:48 16.0 0.119 H -60.4 -36.8 16.0 0.119 0.0 MG
GDP
HOH
 6.157
2.842
4.079
 N
N
SG
 MG
O1A
O
6y09 1 Q9H082 98.95 2e-143 X-RAY
 2020-09-30 CYS A:22 A:48 16.0 0.119 H -60.0 -39.7 16.0 0.119 0.0 MG
GTP
PEG
HOH
 5.846
3.078
8.372
4.032
 N
N
SG
SG
 MG
O1A
O4
O
CYS C:22 B:48 13.0 0.096 H -61.0 -39.5 13.0 0.096 0.0 MG
GTP
HOH
 5.822
3.040
3.843
 N
N
SG
 MG
O1A
O
2g77 2 O35963 98.38 1e-137 X-RAY
 2006-07-25 CYS B:44 B:48 15.0 0.111 H -57.2 -46.5 15.0 0.111 0.0 MG
GDP
AF3
HOH
 5.802
3.016
7.995
3.905
 N
N
N
SG
 MG
O2A
F1
O
1z06 1 O35963 96.13 8e-130 X-RAY
 2005-07-26 CYS A:35 A:48 13.0 0.096 H -64.7 -39.4 13.0 0.096 0.0 MG
GNP
HOH
 5.862
2.968
3.769
 N
N
SG
 MG
O1A
O
6sur 1 O35963 98.27 7e-129 X-RAY
 2020-08-05 CYS A:19 A:48 20.0 0.148 H -68.7 -32.6 20.0 0.148 0.0 MG
GTP
 6.063
2.984
 N
N
 MG
O1A
CYS B:19 B:48 14.0 0.104 H -70.2 -33.3 14.0 0.104 0.0 MG
GTP
 6.085
3.141
 N
N
 MG
O1A
CYS C:19 C:48 17.0 0.126 H -69.3 -34.1 NA NA NA
CYS D:19 D:48 18.0 0.133 H -69.7 -33.6 NA NA NA
CYS E:19 E:48 16.0 0.119 H -68.9 -33.1 NA NA NA
CYS F:19 F:48 15.0 0.111 H -69.2 -33.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h082-f1 1 Q9H082 100.0 2e-176 CYS A:48 A:48 15.0 0.111 H -68.4 -40.5