Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 140375560 . C A CCDS3747.1:NM_031296.1:c.211Cga>Aga_NP_112586.1:p.71R>R Homo sapiens RAB33B, member RAS oncogene family (RAB33B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zay 1 Q9H082 99.48 2e-144 X-RAY
 2020-09-30 ARG A:45 A:71 44.0 0.196 E -128.8 131.7 44.0 0.196 0.0 MG
GDP
HOH
 6.859
7.175
3.785
 NH2
NH1
CD
 MG
O1B
O
ARG C:45 B:71 49.0 0.218 E -123.5 132.4 49.0 0.218 0.0 MG
GDP
HOH
 6.677
6.870
3.571
 NH1
NH1
CA
 MG
O1B
O
6y09 1 Q9H082 98.95 2e-143 X-RAY
 2020-09-30 ARG A:45 A:71 44.0 0.196 E -126.9 135.6 44.0 0.196 0.0 MG
GTP
HOH
 6.139
7.095
4.052
 NH1
NH1
CD
 MG
O2B
O
ARG C:45 B:71 45.0 0.2 E -125.2 130.2 45.0 0.2 0.0 MG
GTP
HOH
 5.828
7.014
4.003
 NH1
NH1
CD
 MG
O1B
O
2g77 2 O35963 98.38 1e-137 X-RAY
 2006-07-25 ARG B:67 B:71 45.0 0.2 E -149.2 140.1 43.0 0.191 0.009 A:Q08484:0.009
 MG
GDP
AF3
HOH
 6.247
7.635
8.265
3.164
 NH2
NH2
NH2
NE
 MG
O3B
F1
O
1z06 1 O35963 96.13 8e-130 X-RAY
 2005-07-26 ARG A:58 A:71 108.0 0.48 E -135.2 158.4 108.0 0.48 0.0 MG
HOH
 9.910
3.506
 CD
CA
 MG
O
6sur 1 O35963 98.27 7e-129 X-RAY
 2020-08-05 ARG A:42 A:71 40.0 0.178 E -133.7 128.1 40.0 0.178 0.0 MG
GTP
 6.397
7.304
 NH1
NH1
 MG
O2B
ARG B:42 B:71 48.0 0.213 E -133.0 127.2 48.0 0.213 0.0 MG
GTP
 6.286
7.278
 NH1
NH1
 MG
O2B
ARG C:42 C:71 58.0 0.258 E -132.8 127.0 NA NA NA
ARG D:42 D:71 42.0 0.187 E -130.7 134.5 NA NA NA
ARG E:42 E:71 52.0 0.231 E -143.3 126.4 NA NA NA
ARG F:42 F:71 46.0 0.204 E -122.5 125.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h082-f1 1 Q9H082 100.0 2e-176 ARG A:71 A:71 64.0 0.284 E -130.9 148.9