Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 140393843 . C A CCDS3747.1:NM_031296.1:c.253Cag>Aag_NP_112586.1:p.85Q>K Homo sapiens RAB33B, member RAS oncogene family (RAB33B), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zay 1 Q9H082 99.48 2e-144 X-RAY
 2020-09-30 GLN A:59 A:85 42.0 0.233 E -109.3 102.9 2.0 0.011 0.222 B:Q8C0J2:0.222
 HOH
 5.119
 OE1
 O
GLN C:59 B:85 41.0 0.228 E -117.1 104.0 2.0 0.011 0.217 D:Q8C0J2:0.217
 HOH
 5.737
 OE1
 O
6y09 1 Q9H082 98.95 2e-143 X-RAY
 2020-09-30 GLN A:59 A:85 39.0 0.217 E -110.1 100.7 2.0 0.011 0.206 B:Q8C0J2:0.206
 HOH
 5.910
 OE1
 O
GLN C:59 B:85 42.0 0.233 E -105.0 103.8 2.0 0.011 0.222 D:Q8C0J2:0.222
 HOH
 5.240
 OE1
 O
2g77 2 O35963 98.38 1e-137 X-RAY
 2006-07-25 GLN B:81 B:85 41.0 0.228 E -97.7 112.5 16.0 0.089 0.139 A:Q08484:0.139
 HOH
 2.299
 OE1
 O
1z06 1 O35963 96.13 8e-130 X-RAY
 2005-07-26 GLN A:72 A:85 22.0 0.122 E -122.6 110.6 22.0 0.122 0.0 HOH
 4.336
 NE2
 O
6sur 1 O35963 98.27 7e-129 X-RAY
 2020-08-05 GLN A:56 A:85 54.0 0.3 E -117.3 96.9 14.0 0.078 0.222 G:Q8C0J2:0.222
GLN B:56 B:85 47.0 0.261 E -112.8 104.7 10.0 0.056 0.205 H:Q8C0J2:0.206
GLN C:56 C:85 41.0 0.228 E -111.4 105.3 NA NA NA
GLN D:56 D:85 44.0 0.244 E -117.7 97.6 NA NA NA
GLN E:56 E:85 51.0 0.283 E -109.6 105.9 NA NA NA
GLN F:56 F:85 48.0 0.267 E -117.8 97.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h082-f1 1 Q9H082 100.0 2e-176 GLN A:85 A:85 34.0 0.189 E -109.0 117.0