Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 140393990 . C A CCDS3747.1:NM_031296.1:c.400Caa>Aaa_NP_112586.1:p.134Q>K Homo sapiens RAB33B, member RAS oncogene family (RAB33B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zay 1 Q9H082 99.48 2e-144 X-RAY
 2020-09-30 GLN A:108 A:134 117.0 0.65 H -73.9 -10.5 117.0 0.65 0.0 PO4
EDO
HOH
 5.181
6.234
2.850
 N
N
NE2
 O2
O2
O
GLN C:108 B:134 114.0 0.633 H -71.1 -21.6 114.0 0.633 0.0 PO4
EDO
PEG
PEG
HOH
 5.015
6.110
8.372
8.480
2.610
 N
N
C
CB
OE1
 O2
O2
O4
O4
O
6y09 1 Q9H082 98.95 2e-143 X-RAY
 2020-09-30 GLN A:108 A:134 127.0 0.706 H -73.4 -22.0 127.0 0.706 0.0 PO4
PEG
HOH
 5.362
6.113
3.369
 N
N
CG
 O1
C3
O
GLN C:108 B:134 130.0 0.722 H -82.7 -20.9 130.0 0.722 0.0 PO4
EDO
PEG
PEG
HOH
 5.216
6.003
8.012
8.406
3.129
 N
N
C
CB
CG
 O2
C2
O4
C4
O
2g77 2 O35963 98.38 1e-137 X-RAY
 2006-07-25 GLN B:130 B:134 135.0 0.75 T -84.7 5.0 135.0 0.75 0.0 HOH
 7.713
 NE2
 O
1z06 1 O35963 96.13 8e-130 X-RAY
 2005-07-26 GLN A:121 A:134 133.0 0.739 H -67.5 -27.0 133.0 0.739 0.0 HOH
 2.745
 NE2
 O
6sur 1 O35963 98.27 7e-129 X-RAY
 2020-08-05 GLN A:105 A:134 145.0 0.806 H -67.5 -30.1 145.0 0.806 0.0
GLN B:105 B:134 144.0 0.8 H -72.6 -31.1 144.0 0.8 0.0
GLN C:105 C:134 133.0 0.739 H -74.4 -32.4 NA NA NA
GLN D:105 D:134 140.0 0.778 H -76.8 -30.8 NA NA NA
GLN E:105 E:134 144.0 0.8 H -61.8 -32.1 NA NA NA
GLN F:105 F:134 148.0 0.822 H -86.7 -30.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h082-f1 1 Q9H082 100.0 2e-176 GLN A:134 A:134 131.0 0.728 H -60.2 -30.5