Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr4 140394080 . C A CCDS3747.1:NM_031296.1:c.490Caa>Aaa_NP_112586.1:p.164Q>K Homo sapiens RAB33B, member RAS oncogene family (RAB33B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6zay 1 Q9H082 99.48 2e-144 X-RAY
 2020-09-30 GLN A:138 A:164 70.0 0.389 H -61.4 -44.5 70.0 0.389 0.0 PO4
PEG
HOH
 3.693
6.735
2.834
 OE1
C
OE1
 O3
O1
O
GLN C:138 B:164 69.0 0.383 H -66.8 -41.7 69.0 0.383 0.0 PEG
HOH
 4.587
2.954
 OE1
NE2
 C4
O
6y09 1 Q9H082 98.95 2e-143 X-RAY
 2020-09-30 GLN A:138 A:164 73.0 0.406 H -68.0 -41.1 73.0 0.406 0.0 PEG
HOH
 6.354
2.899
 C
OE1
 O1
O
GLN C:138 B:164 69.0 0.383 H -62.6 -42.8 69.0 0.383 0.0 PEG
HOH
 3.984
3.105
 OE1
NE2
 C4
O
2g77 2 O35963 98.38 1e-137 X-RAY
 2006-07-25 GLN B:160 B:164 71.0 0.394 H -68.0 -41.6 71.0 0.394 0.0 HOH
 2.706
 NE2
 O
1z06 1 O35963 96.13 8e-130 X-RAY
 2005-07-26 GLN A:151 A:164 72.0 0.4 H -68.7 -42.0 72.0 0.4 0.0 HOH
 2.821
 OE1
 O
6sur 1 O35963 98.27 7e-129 X-RAY
 2020-08-05 GLN A:135 A:164 70.0 0.389 H -67.5 -41.9 70.0 0.389 0.0
GLN B:135 B:164 72.0 0.4 H -67.5 -40.3 72.0 0.4 0.0
GLN C:135 C:164 68.0 0.378 H -67.1 -39.9 NA NA NA
GLN D:135 D:164 69.0 0.383 H -67.3 -48.2 NA NA NA
GLN E:135 E:164 69.0 0.383 H -67.6 -41.8 NA NA NA
GLN F:135 F:164 75.0 0.417 H -66.7 -42.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9h082-f1 1 Q9H082 100.0 2e-176 GLN A:164 A:164 70.0 0.389 H -64.5 -47.2